1MUJ
Crystal structure of murine class II MHC I-Ab in complex with a human CLIP peptide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A-B ALPHA CHAIN | polymer | 190 | 21428.8 | 1 | UniProt (P14434) Pfam (PF00993) Pfam (PF07654) In PDB | Mus musculus (house mouse) | |
2 | B | H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A BETA CHAIN | polymer | 197 | 23192.8 | 1 | UniProt (P14483) Pfam (PF00969) Pfam (PF07654) In PDB | Mus musculus (house mouse) | |
3 | C | CLIP peptide | polymer | 36 | 3696.4 | 1 | UniProt (by SIFTS) (P04233) In PDB | Homo sapiens (human) | |
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
5 | water | water | 18.0 | 171 | Chemie (HOH) |
Sequence modifications
A: -2 - 178 (UniProt: P14434)
B: 1 - 188 (UniProt: P14483)
PDB | External Database | Details |
---|---|---|
Ser 179 | - | cloning artifact |
Ser 180 | - | cloning artifact |
Ala 181 | - | cloning artifact |
Asp 182 | - | cloning artifact |
Leu 183 | - | cloning artifact |
Val 184 | - | cloning artifact |
Pro 185 | - | cloning artifact |
Arg 186 | - | cloning artifact |
PDB | External Database | Details |
---|---|---|
Ser 189 | - | cloning artifact |
Ser 190 | - | cloning artifact |
Ala 191 | - | cloning artifact |
Glu 192 | - | cloning artifact |
Leu 193 | - | cloning artifact |
Val 194 | - | cloning artifact |
Pro 195 | - | cloning artifact |
Arg 196 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 48318.1 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 48760.5 |