1KPU
High resolution crystal structure of the MHC class I complex H-2Kb/VSV8
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | H-2 class I histocompatibility antigen, K-B alpha chain | polymer | 274 | 31648.3 | 1 | UniProt (P01901) Pfam (PF00129) Pfam (PF07654) | Mus musculus (house mouse) | MHC class I H-2Kb heavy chain |
| 2 | B (B) | beta-2-microglobulin | polymer | 99 | 11704.4 | 1 | UniProt (P01887) Pfam (PF07654) | Mus musculus (house mouse) | |
| 3 | C (P) | nucleocapsid | polymer | 8 | 956.1 | 1 | GenBank (534831) UniProt (by SIFTS) (Q88992) | VSV8, nucleocapsid fragment | |
| 4 | D (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
| 5 | E (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 6 | F, G (A, B) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 2 | Chemie (MPD) | |||
| 7 | H, I, J (A, B, P) | water | water | 18.0 | 416 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 44308.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 570.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 457.6 | |
| All* | Total formula weight | 45336.9 |
