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1KNJ

Co-Crystal Structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate Synthase (ispF) from E. coli Involved in Mevalonate-Independent Isoprenoid Biosynthesis, Complexed with CMP/MECDP/Mn2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthasepolymer15917108.11UniProt (P62617)
Pfam (PF02542)
Escherichia coliMECPS
2B
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
3C
(A)
CYTIDINE-5'-MONOPHOSPHATEnon-polymer323.21Chemie (C5P)
4D
(A)
2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATEnon-polymer278.11Chemie (CDI)
5E
(A)
waterwater18.022Chemie (HOH)
Sequence modifications
A: 1 - 159 (UniProt: P62617)
PDBExternal DatabaseDetails
Mse 1Met 1modified residue
Mse 105Met 105modified residue
Mse 112Met 112modified residue
Mse 124Met 124modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17108.1
Non-Polymers*Number of molecules3
Total formula weight656.2
All*Total formula weight17764.3
*Water molecules are not included.

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PDB entries from 2025-12-17

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