1KFV
Crystal Structure of Lactococcus lactis Formamido-pyrimidine DNA Glycosylase (alias Fpg or MutM) Non Covalently Bound to an AP Site Containing DNA.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (D, G) | 5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*C)-3' | polymer | 13 | 3683.4 | 2 | |||
2 | B, D (E, H) | 5'-D(*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*AP*G)-3' | polymer | 13 | 4066.7 | 2 | |||
3 | E, F (A, B) | Formamido-pyrimidine DNA glycosylase | polymer | 271 | 31263.7 | 2 | UniProt (P42371) Pfam (PF01149) Pfam (PF06831) Pfam (PF06827) | Lactococcus lactis | FAPY-DNA glycosylase, FPG, MUTM |
4 | G, I (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | H, J (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
6 | K, L, M, N, O... (D, E, G, H, A...) | water | water | 18.0 | 54 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 271 (UniProt: P42371)
PDB | External Database | Details |
---|---|---|
Gly 1 | Pro 2 | engineered mutation |
Mse 32 | Met 33 | modified residue |
Mse 75 | Met 76 | modified residue |
Mse 96 | Met 97 | modified residue |
- | Asp 139 | see remark 999 |
Mse 231 | Met 233 | modified residue |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 78027.6 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 315.0 | |
All* | Total formula weight | 78342.6 |