1JRO
Crystal Structure of Xanthine Dehydrogenase from Rhodobacter capsulatus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | xanthine dehydrogenase, chain A | polymer | 462 | 49347.5 | 4 | EMBL (2956674) Pfam (PF00111) Pfam (PF01799) Pfam (PF00941) Pfam (PF03450) UniProt (by SIFTS) (O54050) | Rhodobacter capsulatus | XD |
| 2 | B, D, F, H (B, D, F, H) | xanthine dehydrogenase, chain B | polymer | 777 | 82978.0 | 4 | EMBL (13397863) Pfam (PF01315) Pfam (PF02738) Pfam (PF20256) UniProt (by SIFTS) (O54051) | Rhodobacter capsulatus | XD |
| 3 | AA, BA, I, J, O... (G, A, C, E) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 8 | Chemie (FES) | |||
| 4 | CA, K, Q, W (G, A, C, E) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 4 | Chemie (FAD) | |||
| 5 | DA, L, R, X (H, B, D, F) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 6 | EA, M, S, Y (H, B, D, F) | PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER | non-polymer | 395.4 | 4 | Chemie (MTE) | |||
| 7 | FA, N, T, Z (H, B, D, F) | DIOXOTHIOMOLYBDENUM(VI) ION | non-polymer | 161.0 | 4 | Chemie (MOS) | |||
| 8 | GA, HA, IA, JA, KA... (A, B, C, D, E...) | water | water | 18.0 | 123 | Chemie (HOH) |
Sequence modifications
B, D, F, H: 1 - 777 (EMBL: 13397863)
| PDB | External Database | Details |
|---|---|---|
| Arg 772 | Gly 772 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 529301.9 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 6934.5 | |
| All* | Total formula weight | 536236.5 |
