1G1S
P-SELECTIN LECTIN/EGF DOMAINS COMPLEXED WITH PSGL-1 PEPTIDE
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | P-SELECTIN | polymer | 162 | 19131.2 | 2 | UniProt (P16109) Pfam (PF00059) | Homo sapiens (human) | GRANULE MEMBRANE PROTEIN 140, GMP-140, PADGEM, CD62P, LEUKOCYTE-ENDOTHELIAL CELL ADHESION MOLECULE 3, LECAM3 |
| 2 | C, D (C, D) | PSGL-1 PEPTIDE | polymer | 28 | 3666.8 | 2 | UniProt (Q14242) | Homo sapiens (human) | PSGL-1 |
| 3 | E, F (E, F) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-[beta-D-galactopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-galactopyranose | branched | 1186.1 | 2 | In PDB GlyTouCan (G45596OR) | |||
| 4 | G, J (A, B) | STRONTIUM ION | non-polymer | 87.6 | 2 | Chemie (SR) | |||
| 5 | H, I, L, M, N... (A, B) | (4R)-2-METHYLPENTANE-2,4-DIOL | non-polymer | 118.2 | 7 | Chemie (MRD) | |||
| 6 | K, Q (B, C) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 7 | R, S, T, U (A, B, C, D) | water | water | 18.0 | 224 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 158 (UniProt: P16109)
C, D: 601 - 619 (UniProt: Q14242)
| PDB | External Database | Details |
|---|---|---|
| Asp 158 | Glu 199 | conflict |
| Asp 159 | - | cloning artifact |
| Asp 160 | - | cloning artifact |
| Asp 161 | - | cloning artifact |
| Lys 162 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Tys 605 | Tyr 46 | modified residue |
| Tys 607 | Tyr 48 | modified residue |
| Tys 610 | Tyr 51 | modified residue |
| Arg 620 | - | cloning artifact |
| Pro 621 | - | cloning artifact |
| Met 622 | - | cloning artifact |
| Met 623 | - | cloning artifact |
| Asp 624 | - | cloning artifact |
| Asp 625 | - | cloning artifact |
| Asp 626 | - | cloning artifact |
| Asp 627 | - | cloning artifact |
| Lys 628 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 45596.1 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 2372.2 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1048.4 | |
| All* | Total formula weight | 49016.7 |






