1FZM
MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN | polymer | 274 | 31587.3 | 1 | UniProt (P01901) Pfam (PF00129) Pfam (PF07654) In PDB | Mus musculus (house mouse) | |
| 2 | B | PROTEIN (BETA-2-MICROGLOBULIN) | polymer | 99 | 11704.4 | 1 | UniProt (P01887) Pfam (PF07654) In PDB | Mus musculus (house mouse) | |
| 3 | P | PROTEIN (NUCLEOCAPSID PROTEIN) | polymer | 8 | 956.1 | 1 | UniProt (P11212) In PDB | VSV8 | |
| 4 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G28454KX) | |||
| 5 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 6 | A, B | PHOSPHATE ION | non-polymer | 95.0 | 2 | Chemie (PO4) | |||
| 7 | A | (4R)-2-METHYLPENTANE-2,4-DIOL | non-polymer | 118.2 | 1 | Chemie (MRD) | |||
| 8 | A, B | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 2 | Chemie (MPD) | |||
| 9 | water | water | 18.0 | 276 | Chemie (HOH) |
Sequence modifications
A: 1 - 274 (UniProt: P01901)
| PDB | External Database | Details |
|---|---|---|
| Phe 22 | Tyr 43 | engineered mutation |
| Ile 23 | Met 44 | engineered mutation |
| Ser 24 | Glu 45 | engineered mutation |
| Asn 30 | Asp 51 | engineered mutation |
| Cso 121 | Cys 142 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 44247.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 570.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 765.7 | |
| All* | Total formula weight | 45583.9 |
