1D9K
CRYSTAL STRUCTURE OF COMPLEX BETWEEN D10 TCR AND PMHC I-AK/CA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, F (A, E) | T-CELL RECEPTOR D10 (ALPHA CHAIN) | polymer | 110 | 12399.9 | 2 | GenBank (5724764) Pfam (PF07686) UniProt (by SIFTS) (P01739) | Mus musculus (house mouse) | |
2 | B, G (B, F) | T-CELL RECEPTOR D10 (BETA CHAIN) | polymer | 112 | 12131.4 | 2 | GenBank (1791255) Pfam (PF07686) UniProt (by SIFTS) (P04213) | Mus musculus (house mouse) | |
3 | C, H (C, G) | MHC I-AK A CHAIN (ALPHA CHAIN) | polymer | 183 | 20971.4 | 2 | UniProt (P01910) Pfam (PF00993) Pfam (PF07654) | Mus musculus (house mouse) | MHC I-AK |
4 | D, I (D, H) | MHC I-AK B CHAIN (BETA CHAIN) | polymer | 188 | 22340.1 | 2 | UniProt (P06343) Pfam (PF00969) Pfam (PF07654) | Mus musculus (house mouse) | MHC I-AK |
5 | E, J (P, Q) | CONALBUMIN PEPTIDE | polymer | 16 | 1700.8 | 2 | UniProt (by SIFTS) (P02789) | Mus musculus (house mouse) | |
6 | K, L, M, N (I, J, K, L) | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G07375KG) | |||
7 | O, P (C, G) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
A, E: 2 - 117 (GenBank: 5724764)
B, F: 3 - 116 (GenBank: 1791255)
D, H: 2 - 190 (UniProt: P06343)
PDB | External Database | Details |
---|---|---|
Ser 115 | Cys 138 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly 116 | Glu 142 | SEE REMARK 999 |
Ser 116 | Asp 143 | SEE REMARK 999 |
PDB | External Database | Details |
---|---|---|
Gly 2 | Asn 29 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 139087.1 | |
Branched | Number of molecules | 4 |
Total formula weight | 1697.6 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 141227.1 |