1AFV
HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 CAPSID PROTEIN | polymer | 151 | 16716.2 | 2 | UniProt (P12497) In PDB | Human immunodeficiency virus 1 | HIV-1 CA, HIV CA, HIV P24, P24 |
2 | L, M | ANTIBODY FAB25.3 FRAGMENT (LIGHT CHAIN) | polymer | 217 | 23741.3 | 2 | GenBank (600718) | Mus musculus (house mouse) | FAB, FAB LIGHT CHAIN, FAB HEAVY CHAIN |
3 | H, K | ANTIBODY FAB25.3 FRAGMENT (HEAVY CHAIN) | polymer | 220 | 23701.4 | 2 | UniProt (Q99LC4) Pfam (PF07686) Pfam (PF07654) In PDB | Mus musculus (house mouse) | FAB, FAB LIGHT CHAIN, FAB HEAVY CHAIN |
4 | L, M | LEAD (II) ION | non-polymer | 207.2 | 2 | Chemie (PB) |
Sequence modifications
L, M: 3 - 217 (GenBank: 600718)
H, K: 1 - 219 (UniProt: Q99LC4)
PDB | External Database | Details |
---|---|---|
Leu 4 | Met 4 | conflict |
Arg 18 | Ser 18 | conflict |
Ala 19 | Val 19 | conflict |
Asp 30 | Glu 30 | conflict |
Asn 31 | Tyr 31 | conflict |
Ile 34 | Thr 34 | conflict |
Phe 36 | Leu 36 | conflict |
Asn 38 | Gln 38 | conflict |
Phe 40 | Tyr 40 | conflict |
Ala 54 | Gly 54 | conflict |
Leu 58 | Val 58 | conflict |
Gly 59 | Glu 59 | conflict |
Met 82 | Val 82 | conflict |
Glu 85 | Asp 85 | conflict |
Thr 87 | Ile 87 | conflict |
Met 89 | Ile 89 | conflict |
Lys 96 | Arg 96 | conflict |
Glu 97 | Lys 97 | conflict |
Leu 100 | Ala 100 | conflict |
Ala 104 | Ser 104 | conflict |
Val 108 | Leu 108 | conflict |
Leu 110 | Ile 110 | conflict |
PDB | External Database | Details |
---|---|---|
Gln 1 | Glu 22 | conflict |
Gln 3 | Lys 24 | conflict |
Gln 5 | His 26 | conflict |
Gln 6 | Glu 27 | conflict |
Pro 7 | Ser 28 | conflict |
Ser 9 | Pro 30 | conflict |
Val 10 | Gly 31 | conflict |
Ala 16 | Thr 37 | conflict |
Leu 20 | Ile 41 | conflict |
Ser 31 | Asn 52 | conflict |
Ser 32 | Tyr 53 | conflict |
Ile 34 | Leu 55 | conflict |
His 35 | Gly 56 | conflict |
Ala 37 | Val 58 | conflict |
Gln 43 | His 64 | conflict |
Glu 50 | Asp 71 | conflict |
His 52 | Tyr 73 | conflict |
Asn 54 | Gly 75 | conflict |
Ser 55 | Gly 76 | conflict |
Asn 57 | Tyr 78 | conflict |
Val 72 | Ala 93 | conflict |
Val 81 | Met 102 | conflict |
Asp 82 | Gln 103 | conflict |
Tyr 95 | Phe 116 | conflict |
Trp 99 | Phe 120 | conflict |
Arg 100 | Tyr 121 | conflict |
Pro 104 | Ser 125 | conflict |
- | Trp 127 | deletion |
Tyr 109 | Val 131 | conflict |
Leu 116 | Val 138 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 128317.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 414.4 | |
All* | Total formula weight | 128732.1 |