11CH
CHAP domain of Staphylococcus aureus-specific lysin L1 covalently complexed to Pep1a-CMK substrate mimic
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Probable cell wall hydrolase LytN | polymer | 146 | 16480.2 | 1 | UniProt (Q6GHI8) | Staphylococcus aureus | |
| 2 | B (A) | N~2~-acetyl-N~6~-{(4M)-3-carboxy-4-[(10aR)-6-hydroxy-3-oxo-4,10a-dihydro-3H-xanthen-9-yl]benzene-1-carbonyl}-D-lysyl-L-alanyl-D-alpha-glutaminyl-N-[(2R)-3-oxobutan-2-yl]-L-lysinamide | non-polymer | 943.0 | 1 | Chemie (A1DEZ) | |||
| 3 | C, D, E, F, H... (A) | SODIUM ION | non-polymer | 23.0 | 6 | Chemie (NA) PubChem (923) | |||
| 4 | G (A) | THIOCYANATE ION | non-polymer | 58.1 | 1 | Chemie (SCN) PubChem (9322) | |||
| 5 | J (A) | water | water | 18.0 | 130 | Chemie (HOH) |
Sequence modifications
A: 76 - 215 (UniProt: Q6GHI8)
| PDB | External Database | Details |
|---|---|---|
| Pro 70 | - | expression tag |
| Asn 71 | - | expression tag |
| Ser 72 | - | expression tag |
| Gly 73 | - | expression tag |
| Ser 74 | - | expression tag |
| Ser 75 | - | expression tag |
| Ser 82 | Thr 250 | conflict |
| Gly 85 | Asn 253 | conflict |
| Lys 86 | Arg 254 | conflict |
| Phe 94 | Tyr 262 | conflict |
| Asp 117 | Tyr 285 | conflict |
| Tyr 118 | Gly 286 | conflict |
| Asn 169 | Asp 337 | conflict |
| Asn 173 | Lys 341 | conflict |
| Gln 175 | Met 343 | conflict |
| Gly 186 | Asn 354 | conflict |
| Glu 189 | Trp 357 | conflict |
| Gln 192 | Ala 360 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 16480.2 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1139.0 | |
| All* | Total formula weight | 17619.2 |
