4ZM0
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ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT
Descriptor:Antitoxin phd, DNA/RNA (5'-D(CP*TP*TP*GP*TP*GP*TP*AP*CP*AP*CP*AP*T)-3'), DNA/RNA (5'-D(CP*AP*TP*GP*TP*GP*TP*AP*CP*AP*CP*AP*A)-3'), ...
Authors:Garcia-Pino, A., Loris, R.
Deposit date:2015-05-02
Release date:2016-04-20
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation.
Nat.Chem.Biol., 12, 2016
4ZM2
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ANTITOXIN PHD FROM PHAGE P1 IN COMPLEX WITH ITS OPERATOR DNA INVERTED REPEAT IN A MONOCLINIC SPACE GROUP
Descriptor:Antitoxin phd, DNA (5'-D(GP*CP*TP*TP*GP*TP*GP*TP*AP*CP*AP*CP*AP*T)-3'), DNA (5'-D(CP*AP*TP*GP*TP*GP*TP*AP*CP*AP*CP*AP*AP*G)-3')
Authors:Garcia-Pino, A., Loris, R.
Deposit date:2015-05-02
Release date:2016-04-20
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (3.88 Å)
Cite:An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation.
Nat.Chem.Biol., 12, 2016
4ZLX
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N-TERMINAL DNA BINDING DOMAIN OF THE ANTITOXIN PHD FROM PHAGE P1
Descriptor:Antitoxin phd, ACETATE ION
Authors:Garcia-Pino, A., Loris, R.
Deposit date:2015-05-01
Release date:2016-04-20
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation.
Nat.Chem.Biol., 12, 2016
2YQL
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SOLUTION STRUCTURE OF THE PHD DOMAIN IN PHD FINGER PROTEIN 21A
Descriptor:PHD finger protein 21A, ZINC ION
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-03-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the PHD domain in PHD finger protein 21A
To be Published
1WEE
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SOLUTION STRUCTURE OF PHD DOMAIN IN PHD FINGER FAMILY PROTEIN
Descriptor:PHD finger family protein, ZINC ION
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-24
Release date:2004-11-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in PHD finger family protein
To be Published
1WEQ
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SOLUTION STRUCTURE OF PHD DOMAIN IN PHD FINGER PROTEIN 7
Descriptor:PHD finger protein 7, ZINC ION
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in PHD finger protein 7
To be Published
1WE9
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SOLUTION STRUCTURE OF PHD DOMAIN IN NUCLEIC ACID BINDING PROTEIN-LIKE NP_197993
Descriptor:PHD finger family protein, ZINC ION
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-24
Release date:2004-11-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in nucleic acid binding protein-like NP_197993
To be Published
2E5Q
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SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER PROTEIN 19, ISOFORM B [HOMO SAPIENS]
Descriptor:PHD finger protein 19
Authors:Dang, W., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]
To be Published
5XHT
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THE PHD FINGER OF HUMAN KIAA1045 PROTEIN
Descriptor:PHD finger protein 24, ZINC ION
Authors:Miyamoto, K.
Deposit date:2017-04-24
Release date:2018-05-02
Method:SOLUTION NMR
Cite:Solution structure of the PHD finger from the human KIAA1045 protein
Protein Sci., 27, 2018
2E5P
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SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER PROTEIN 1 (PHF1 PROTEIN)
Descriptor:PHD finger protein 1
Authors:Dang, W., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Terada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the TUDOR domain of PHD finger protein 1 (PHF1 protein)
To be Published
2EQM
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SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER PROTEIN 20-LIKE 1 [HOMO SAPIENS]
Descriptor:PHD finger protein 20-like 1
Authors:Dang, W., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Tarada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the TUDOR domain of PHD finger protein 20-like 1 [Homo sapiens]
To be Published
2M85
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PHD DOMAIN FROM HUMAN SHPRH
Descriptor:E3 ubiquitin-protein ligase SHPRH, ZINC ION
Authors:Machado, L.E.S.F., Pustovalova, Y., Pozhidaeva, A., Almeida, F.C.L., Bezsonova, I., Korzhnev, D.M.
Deposit date:2013-05-07
Release date:2013-08-14
Last modified:2013-09-11
Method:SOLUTION NMR
Cite:PHD domain from human SHPRH.
J.Biomol.Nmr, 56, 2013
2DME
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SOLUTION STRUCTURE OF THE TFIIS DOMAIN II OF HUMAN PHD FINGER PROTEIN 3
Descriptor:PHD finger protein 3
Authors:Yoneyama, M., Tochio, N., Koshiba, S., Watabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the TFIIS domain II of human PHD finger protein 3
To be Published
2EQU
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SOLUTION STRUCTURE OF THE TUDOR DOMAIN OF PHD FINGER PROTEIN 20-LIKE 1
Descriptor:PHD finger protein 20-like 1
Authors:Futami, K., Suzuki, S., Muto, Y., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the tudor domain of PHD finger protein 20-like 1
To be Published
2FUU
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NMR SOLUTION STRUCTURE OF THE PHD DOMAIN FROM THE HUMAN BPTF IN COMPLEX WITH H3(1-15)K4ME3 PEPTIDE
Descriptor:bromodomain PHD finger transcription factor, Histone H3, ZINC ION
Authors:Ilin, S., Patel, D.J.
Deposit date:2006-01-27
Release date:2006-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2FUI
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NMR SOLUTION STRUCTURE OF PHD FINGER FRAGMENT OF HUMAN BPTF IN FREE STATE
Descriptor:bromodomain PHD finger transcription factor
Authors:Ilin, S., Patel, D.J.
Deposit date:2006-01-26
Release date:2006-07-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F6J
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE H3(1-15)K4ME3 BOUND STATE
Descriptor:bromodomain PHD finger transcription factor, histone H3, N-terminal, ...
Authors:Li, H., Patel, D.J.
Deposit date:2005-11-29
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2FSA
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE H3(1-15)K4ME2 BOUND STATE
Descriptor:bromodomain PHD finger transcription factor, Histone H3(1-15)K4me2 peptide, ZINC ION
Authors:Li, H., Patel, D.J.
Deposit date:2006-01-21
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2F6N
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CRYSTAL STRUCTURE OF PHD FINGER-LINKER-BROMODOMAIN FRAGMENT OF HUMAN BPTF IN THE FREE FORM
Descriptor:bromodomain PHD finger transcription factor, ZINC ION
Authors:Li, H., Patel, D.J.
Deposit date:2005-11-29
Release date:2006-07-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF.
Nature, 442, 2006
2RSD
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SOLUTION STRUCTURE OF THE PLANT HOMEODOMAIN (PHD) OF THE E3 SUMO LIGASE SIZ1 FROM RICE
Descriptor:E3 SUMO-protein ligase SIZ1, ZINC ION
Authors:Shindo, H., Tsuchiya, W., Suzuki, R., Yamazaki, T.
Deposit date:2012-01-12
Release date:2012-08-15
Method:SOLUTION NMR
Cite:PHD finger of the SUMO ligase Siz/PIAS family in rice reveals specific binding for methylated histone H3 at lysine 4 and arginine 2
Febs Lett., 586, 2012
3DD7
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STRUCTURE OF DOCH66Y IN COMPLEX WITH THE C-TERMINAL DOMAIN OF PHD
Descriptor:Death on curing protein, Prevent host death protein, BROMIDE ION
Authors:Garcia-Pino, A., Loris, R.
Deposit date:2008-06-05
Release date:2008-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Doc of Prophage P1 Is Inhibited by Its Antitoxin Partner Phd through Fold Complementation
J.Biol.Chem., 283, 2008
3KH2
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CRYSTAL STRUCTURE OF THE P1 BACTERIOPHAGE DOC TOXIN (F68S) IN COMPLEX WITH THE PHD ANTITOXIN (L17M/V39A). NORTHEAST STRUCTURAL GENOMICS TARGETS ER385-ER386
Descriptor:Death on curing protein, Prevent host death protein, CHLORIDE ION, ...
Authors:Arbing, M.A., Kuzin, A.P., Su, M., Abashidze, M., Verdon, G., Liu, M., Xiao, R., Acton, T., Inouye, M., Montelione, G.T., Woychik, N.A., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-29
Release date:2010-08-18
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal Structures of Phd-Doc, HigA, and YeeU Establish Multiple Evolutionary Links between Microbial Growth-Regulating Toxin-Antitoxin Systems.
Structure, 18, 2010
3SOU
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STRUCTURE OF UHRF1 PHD FINGER IN COMPLEX WITH HISTONE H3 1-9 PEPTIDE
Descriptor:E3 ubiquitin-protein ligase UHRF1, Histone H3, ZINC ION
Authors:Rajakumara, E., Patel, D.J.
Deposit date:2011-06-30
Release date:2011-08-03
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8001 Å)
Cite:PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011
3SOW
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STRUCTURE OF UHRF1 PHD FINGER IN COMPLEX WITH HISTONE H3K4ME3 1-9 PEPTIDE
Descriptor:E3 ubiquitin-protein ligase UHRF1, Histone H3, ZINC ION
Authors:Rajakumara, E., Patel, D.J.
Deposit date:2011-06-30
Release date:2011-08-03
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.9501 Å)
Cite:PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011
3SOX
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STRUCTURE OF UHRF1 PHD FINGER IN THE FREE FORM
Descriptor:E3 ubiquitin-protein ligase UHRF1, ZINC ION
Authors:Rajakumara, E., Patel, D.J.
Deposit date:2011-06-30
Release date:2011-08-03
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6501 Å)
Cite:PHD Finger Recognition of Unmodified Histone H3R2 Links UHRF1 to Regulation of Euchromatic Gene Expression.
Mol.Cell, 43, 2011