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8V84
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BU of 8v84 by Molmil
60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
8V83
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BU of 8v83 by Molmil
60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
8V87
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BU of 8v87 by Molmil
60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)
Descriptor: 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 25S ribosomal RNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ...
Authors:Cruz, V.E, Weirich, C.S, Peddada, N, Erzberger, J.P.
Deposit date:2023-12-04
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis.
Nat Commun, 15, 2024
8PV2
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BU of 8pv2 by Molmil
Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1
Descriptor: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
Deposit date:2023-07-17
Release date:2023-11-15
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
8FKX
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BU of 8fkx by Molmil
Human nucleolar pre-60S ribosomal subunit (State E)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKP
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BU of 8fkp by Molmil
Human nucleolar pre-60S ribosomal subunit (State A1)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L13, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKW
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BU of 8fkw by Molmil
Human nucleolar pre-60S ribosomal subunit (State D2)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKY
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BU of 8fky by Molmil
Human nucleolar pre-60S ribosomal subunit (State F)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKQ
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BU of 8fkq by Molmil
Human nucleolar pre-60S ribosomal subunit (State A2)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L13, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKV
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BU of 8fkv by Molmil
Human nucleolar pre-60S ribosomal subunit (State D1)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.47 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKU
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BU of 8fku by Molmil
Human nucleolar pre-60S ribosomal subunit (State C2)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKS
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BU of 8fks by Molmil
Human nucleolar pre-60S ribosomal subunit (State B2)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKR
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BU of 8fkr by Molmil
Human nucleolar pre-60S ribosomal subunit (State B1)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FKT
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BU of 8fkt by Molmil
Human nucleolar pre-60S ribosomal subunit (State C1)
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ...
Authors:Vanden Broeck, A, Klinge, S.
Deposit date:2022-12-21
Release date:2023-07-12
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Principles of human pre-60 S biogenesis.
Science, 381, 2023
8I9P
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BU of 8i9p by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Mak16
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, 60S ribosomal protein L16-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9X
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BU of 8i9x by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-1
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9T
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BU of 8i9t by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-1
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9Z
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BU of 8i9z by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Spb4
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9R
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BU of 8i9r by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State 5S RNP
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, 60S ribosomal protein L16-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9V
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BU of 8i9v by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Dbp10-2
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8IA0
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BU of 8ia0 by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - State Puf6
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9W
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BU of 8i9w by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Dbp10-3
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8I9Y
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BU of 8i9y by Molmil
Cryo-EM structure of a Chaetomium thermophilum pre-60S ribosomal subunit - Ytm1-2
Descriptor: 60S ribosomal protein L12-like protein, 60S ribosomal protein L13, 60S ribosomal protein L14-like protein, ...
Authors:Lau, B, Huang, Z, Beckmann, R, Hurt, E, Cheng, J.
Deposit date:2023-02-07
Release date:2023-05-17
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Embo Rep., 24, 2023
8E5T
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BU of 8e5t by Molmil
Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 60S ribosomal protein L13-A, ...
Authors:Sanghai, Z.A, Piwowarczyk, R, Vanden Broeck, A, Klinge, S.
Deposit date:2022-08-22
Release date:2023-04-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4 Å)
Cite:A co-transcriptional ribosome assembly checkpoint controls nascent large ribosomal subunit maturation.
Nat.Struct.Mol.Biol., 30, 2023
8EUG
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BU of 8eug by Molmil
Ytm1 associated nascent 60S ribosome State 3
Descriptor: 60S ribosomal protein L10-A, 60S ribosomal protein L11-A, 60S ribosomal protein L13, ...
Authors:Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M.
Deposit date:2022-10-18
Release date:2022-11-30
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Mol.Cell, 82, 2022

 

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PDB entries from 2024-09-18

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