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1BMT
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HOW A PROTEIN BINDS B12: A 3.O ANGSTROM X-RAY STRUCTURE OF THE B12-BINDING DOMAINS OF METHIONINE SYNTHASE
Descriptor: CO-METHYLCOBALAMIN, METHIONINE SYNTHASE
Authors:Drennan, C.L, Huang, S, Drummond, J.T, Matthews, R.G, Ludwig, M.L.
Deposit date:1994-09-02
Release date:1995-06-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase.
Science, 266, 1994
1REQ
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BU of 1req by Molmil
METHYLMALONYL-COA MUTASE
Descriptor: COBALAMIN, DESULFO-COENZYME A, GLYCEROL, ...
Authors:Evans, P.R, Mancia, F.
Deposit date:1996-01-19
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:How coenzyme B12 radicals are generated: the crystal structure of methylmalonyl-coenzyme A mutase at 2 A resolution.
Structure, 4, 1996
2REQ
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BU of 2req by Molmil
METHYLMALONYL-COA MUTASE, NON-PRODUCTIVE COA COMPLEX, IN OPEN CONFORMATION REPRESENTING SUBSTRATE-FREE STATE
Descriptor: COBALAMIN, COENZYME A, METHYLMALONYL-COA MUTASE
Authors:Evans, P.R, Mancia, F.
Deposit date:1997-09-22
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism.
Structure, 6, 1998
3REQ
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BU of 3req by Molmil
METHYLMALONYL-COA MUTASE, SUBSTRATE-FREE STATE (POOR QUALITY STRUCTURE)
Descriptor: ADENOSINE, COBALAMIN, METHYLMALONYL-COA MUTASE
Authors:Evans, P.R, Mancia, F.
Deposit date:1997-12-04
Release date:1998-03-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism.
Structure, 6, 1998
5REQ
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BU of 5req by Molmil
Methylmalonyl-COA MUTASE, Y89F Mutant, substrate complex
Descriptor: COBALAMIN, GLYCEROL, METHYLMALONYL(CARBADETHIA)-COENZYME A, ...
Authors:Evans, P.R, Thomae, N.H.
Deposit date:1998-08-03
Release date:1998-08-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Stabilization of radical intermediates by an active-site tyrosine residue in methylmalonyl-CoA mutase.
Biochemistry, 37, 1998
1BE1
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BU of 1be1 by Molmil
GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: GLUTAMATE MUTASE
Authors:Tollinger, M, Konrat, R, Hilbert, B.H, Marsh, E.N.G, Kraeutler, B.
Deposit date:1998-05-19
Release date:1998-08-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:How a protein prepares for B12 binding: structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium tetanomorphum
Structure, 6, 1998
7REQ
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BU of 7req by Molmil
METHYLMALONYL-COA MUTASE, 2-CARBOXYPROPYL-COA INHIBITOR COMPLEX
Descriptor: 2-CARBOXYPROPYL-COENZYME A, COBALAMIN, GLYCEROL, ...
Authors:Evans, P.R, Mancia, F.
Deposit date:1998-09-10
Release date:1998-09-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of substrate complexes of methylmalonyl-CoA mutase.
Biochemistry, 38, 1999
4REQ
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BU of 4req by Molmil
Methylmalonyl-COA Mutase substrate complex
Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ...
Authors:Evans, P.R, Mancia, F.
Deposit date:1998-06-17
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism.
Structure, 6, 1998
1B1A
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GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: GLUTAMATE MUTASE
Authors:Hoffmann, B, Konrat, R, Bothe, H, Buckel, W, Kraeutler, B.
Deposit date:1998-11-19
Release date:1999-07-13
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Structure and dynamics of the B12-binding subunit of glutamate mutase from Clostridium cochlearium.
Eur.J.Biochem., 263, 1999
6REQ
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BU of 6req by Molmil
METHYLMALONYL-COA MUTASE, 3-CARBOXYPROPYL-COA INHIBITOR COMPLEX
Descriptor: 3-CARBOXYPROPYL-COENZYME A, COBALAMIN, GLYCEROL, ...
Authors:Evans, P.R, Mancia, F.
Deposit date:1998-09-03
Release date:1999-09-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of substrate complexes of methylmalonyl-CoA mutase.
Biochemistry, 38, 1999
1CB7
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GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM RECONSTITUTED WITH METHYL-COBALAMIN
Descriptor: CO-METHYLCOBALAMIN, D(-)-TARTARIC ACID, PROTEIN (GLUTAMATE MUTASE)
Authors:Gruber, K, Reitzer, R, Kratky, C.
Deposit date:1999-03-03
Release date:2000-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights.
Structure Fold.Des., 7, 1999
1CCW
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STRUCTURE OF THE COENZYME B12 DEPENDENT ENZYME GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM
Descriptor: CYANOCOBALAMIN, D(-)-TARTARIC ACID, PROTEIN (GLUTAMATE MUTASE)
Authors:Reitzer, R, Gruber, K, Kratky, C.
Deposit date:1999-03-01
Release date:2000-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights
Structure Fold.Des., 7, 1999
1E1C
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BU of 1e1c by Molmil
METHYLMALONYL-COA MUTASE H244A Mutant
Descriptor: COBALAMIN, DESULFO-COENZYME A, METHYLMALONYL-COA MUTASE ALPHA CHAIN, ...
Authors:Evans, P.R, Thoma, N.H.
Deposit date:2000-04-30
Release date:2000-05-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Protection of Radical Intermediates at the Active Site of Adenosylcobalamin-Dependent Methylmalonyl-Coa Mutase
Biochemistry, 39, 2000
1ID8
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BU of 1id8 by Molmil
NMR STRUCTURE OF GLUTAMATE MUTASE (B12-BINDING SUBUNIT) COMPLEXED WITH THE VITAMIN B12 NUCLEOTIDE
Descriptor: 2-HYDROXY-PROPYL-AMMONIUM, METHYLASPARTATE MUTASE S CHAIN, PHOSPHORIC ACID MONO-[5-(5,6-DIMETHYL-BENZOIMIDAZOL-1-YL)-4-HYDROXY-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER
Authors:Tollinger, M, Eichmuller, C, Konrat, R, Huhta, M.S, Marsh, E.N.G, Krautler, B.
Deposit date:2001-04-04
Release date:2001-06-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The B(12)-binding subunit of glutamate mutase from Clostridium tetanomorphum traps the nucleotide moiety of coenzyme B(12).
J.Mol.Biol., 309, 2001
1K98
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BU of 1k98 by Molmil
AdoMet complex of MetH C-terminal fragment
Descriptor: COBALAMIN, Methionine synthase, SULFATE ION
Authors:Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
Deposit date:2001-10-27
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
1K7Y
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BU of 1k7y by Molmil
E. coli MetH C-terminal fragment (649-1227)
Descriptor: COBALAMIN, SULFATE ION, methionine synthase
Authors:Bandarian, V, Pattridge, K.A, Lennon, B.W, Huddler, D.P, Matthews, R.G, Ludwig, M.L.
Deposit date:2001-10-22
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Domain alternation switches B(12)-dependent methionine synthase to the activation conformation.
Nat.Struct.Biol., 9, 2002
1FMF
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BU of 1fmf by Molmil
REFINED SOLUTION STRUCTURE OF THE (13C,15N-LABELED) B12-BINDING SUBUNIT OF GLUTAMATE MUTASE FROM CLOSTRIDIUM TETANOMORPHUM
Descriptor: METHYLASPARTATE MUTASE S CHAIN
Authors:Hoffmann, B, Konrat, R, Tollinger, M, Huhta, M, Marsh, E.N.G, Kraeutler, B.
Deposit date:2000-08-17
Release date:2002-02-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A protein pre-organized to trap the nucleotide moiety of coenzyme B(12): refined solution structure of the B(12)-binding subunit of glutamate mutase from Clostridium tetanomorphum.
Chembiochem, 2, 2001
1I9C
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BU of 1i9c by Molmil
GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM: COMPLEX WITH ADENOSYLCOBALAMIN AND SUBSTRATE
Descriptor: (2S,3S)-3-methyl-aspartic acid, 5'-DEOXYADENOSINE, COBALAMIN, ...
Authors:Gruber, K, Kratky, C.
Deposit date:2001-03-19
Release date:2002-03-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Radical Shuttling in a Protein: Ribose Pseudorotation Controls Alkyl-Radical Transfer in the Coenzyme B(12) Dependent Enzyme Glutamate Mutase
Angew.Chem.Int.Ed.Engl., 40, 2001
1OZ9
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BU of 1oz9 by Molmil
Crystal structure of AQ_1354, a hypothetical protein from Aquifex aeolicus
Descriptor: Hypothetical protein AQ_1354
Authors:Oganesyan, V, Busso, D, Brandsen, J, Chen, S, Jancarik, J, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2003-04-08
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.894 Å)
Cite:Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus.
Acta Crystallogr.,Sect.D, 59, 2003
1XRS
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BU of 1xrs by Molmil
Crystal structure of Lysine 5,6-Aminomutase in complex with PLP, cobalamin, and 5'-deoxyadenosine
Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, D-lysine 5,6-aminomutase alpha subunit, ...
Authors:Berkovitch, F, Behshad, E, Tang, K.H, Enns, E.A, Frey, P.A, Drennan, C.L.
Deposit date:2004-10-15
Release date:2004-11-09
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1Y80
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BU of 1y80 by Molmil
Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica
Descriptor: CO-5-METHOXYBENZIMIDAZOLYLCOBAMIDE, Predicted cobalamin binding protein, UNKNOWN ATOM OR ION
Authors:Liu, Z.-J, Fu, Z.-Q, Tempel, W, Das, A, Habel, J, Zhou, W, Chang, J, Chen, L, Lee, D, Nguyen, D, Chang, S.-H, Ljungdahl, L, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-12-10
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica
To be published
2I2X
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BU of 2i2x by Molmil
Crystal structure of methanol:cobalamin methyltransferase complex MtaBC from Methanosarcina barkeri
Descriptor: 5-HYDROXYBENZIMIDAZOLYLCOB(III)AMIDE, Methyltransferase 1, POTASSIUM ION, ...
Authors:Hagemeier, C.H, Kruer, M, Thauer, R.K, Warkentin, E, Ermler, U.
Deposit date:2006-08-17
Release date:2006-11-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex
Proc.Natl.Acad.Sci.Usa, 103, 2006
2YXB
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BU of 2yxb by Molmil
Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
Descriptor: Coenzyme B12-dependent mutase
Authors:Handa, N, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-25
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the methylmalonyl-CoA mutase alpha-subunit from Aeropyrum pernix
To be Published
3BIC
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BU of 3bic by Molmil
Crystal structure of human methylmalonyl-CoA mutase
Descriptor: CHLORIDE ION, Methylmalonyl-CoA mutase, mitochondrial precursor
Authors:Ugochukwu, E, Kochan, G, Pantic, N, Parizotto, E, Pilka, E.S, Pike, A.C.W, Gileadi, O, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-11-30
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of the human GTPase MMAA and vitamin B12-dependent methylmalonyl-CoA mutase and insight into their complex formation.
J.Biol.Chem., 285, 2010
3BUL
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BU of 3bul by Molmil
E. coli I690C/G743C MetH C-terminal fragment (649-1227)
Descriptor: COBALAMIN, Methionine synthase
Authors:Koutmos, M, Pattridge, K.A, Ludwig, M.L.
Deposit date:2008-01-03
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A disulfide-stabilized conformer of methionine synthase reveals an unexpected role for the histidine ligand of the cobalamin cofactor.
Proc.Natl.Acad.Sci.Usa, 105, 2008

 

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