4LPQ
 
 | | Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894 | | Descriptor: | CHLORIDE ION, ErfK/YbiS/YcfS/YnhG family protein | | Authors: | Nocek, B, Bigelow, L, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) | | Deposit date: | 2013-07-16 | | Release date: | 2013-11-13 | | Method: | X-RAY DIFFRACTION (1.37 Å) | | Cite: | Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
To be Published
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6TCI
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5ANZ
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4BOL
 | | Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide | | Descriptor: | AMPDH2, D-alanyl-N-[(2S,6R)-6-amino-6-carboxy-1-{[(1R)-1-carboxyethyl]amino}-1-oxohexan-2-yl]-D-glutamine, ZINC ION | | Authors: | Artola-Recolons, C, Martinez-Caballero, S, Lee, M, Carrasco-Lopez, C, Hesek, D, Spink, E.E, Lastochkin, E, Zhang, W, Hellman, L.M, Boggess, B, Mobashery, S, Hermoso, J.A. | | Deposit date: | 2013-05-21 | | Release date: | 2013-07-17 | | Last modified: | 2013-07-31 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Reaction Products and the X-Ray Structure of Ampdh2, a Virulence Determinant of Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
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5NM7
 | | Crystal structure of Burkholderia AP3 phage endolysin | | Descriptor: | GLYCINE, Peptidoglycan-binding domain 1, TRIETHYLENE GLYCOL | | Authors: | Zrubek, K, Wisniewska, M, Rembacz, K, Maciejewska, B, Drulis-Kawa, Z, Dubin, G. | | Deposit date: | 2017-04-05 | | Release date: | 2018-02-14 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | Modular endolysin of Burkholderia AP3 phage has the largest lysozyme-like catalytic subunit discovered to date and no catalytic aspartate residue.
Sci Rep, 7, 2017
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4BJ4
 | | Structure of Pseudomonas aeruginosa amidase Ampdh2 | | Descriptor: | AMPDH2, CITRATE ANION | | Authors: | Martinez-Caballero, C.S, Carrasco-Lopez, C, Artola-Recolons, C, Hermoso, J.A. | | Deposit date: | 2013-04-16 | | Release date: | 2013-07-24 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (1.722 Å) | | Cite: | Reaction Products and the X-Ray Structure of Ampdh2, a Virulence Determinant of Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
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4XXT
 | | Crystal structure of Fused Zn-dependent amidase/peptidase/peptodoglycan-binding domain-containing protein from Clostridium acetobutylicum ATCC 824 | | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, Fusion of predicted Zn-dependent amidase/peptidase (Cell wall hydrolase/DD-carboxypeptidase family) and uncharacterized domain of ErfK family peptodoglycan-binding domain, ... | | Authors: | Chang, C, Cuff, M, Joachimiak, G, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) | | Deposit date: | 2015-01-30 | | Release date: | 2015-02-18 | | Method: | X-RAY DIFFRACTION (1.77 Å) | | Cite: | Crystal structure of Fused Zn-dependent amidase/peptidase/peptodoglycan-binding domain-containing protein from from Clostridium acetobutylicum ATCC 824
To Be Published
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4C2E
 | | Crystal structure of the protease CtpB(S309A) present in a resting state | | Descriptor: | CARBOXY-TERMINAL PROCESSING PROTEASE CTPB | | Authors: | Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T. | | Deposit date: | 2013-08-17 | | Release date: | 2013-12-04 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
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1LBU
 | | HYDROLASE METALLO (ZN) DD-PEPTIDASE | | Descriptor: | MURAMOYL-PENTAPEPTIDE CARBOXYPEPTIDASE, ZINC ION | | Authors: | Charlier, P, Wery, J.-P, Dideberg, O, Frere, J.-M. | | Deposit date: | 1996-03-16 | | Release date: | 1996-11-08 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Streptomyces Albus G D-Ala-A-Ala Carboxypeptidase
Handbook of Metalloproteins, 3, 2004
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7AJO
 | | The X-ray Structure of L,D-transpeptidase LdtA from Vibrio cholerae in complex with the cross-linking reaction intermediate | | Descriptor: | (2~{S},6~{S})-2-azanyl-6-[[(4~{R})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]heptanedioic acid, 1,2-ETHANEDIOL, L,D-transpeptidase YcbB | | Authors: | Batuecas, M.T, Hermoso, J.A. | | Deposit date: | 2020-09-29 | | Release date: | 2021-10-06 | | Last modified: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | The X-ray Structure of L,D-transpeptidase LdtA from Vibrio cholerae in complex with the cross-linking reaction intermediate
To Be Published
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1SLM
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4C2C
 | | Crystal structure of the protease CtpB in an active state | | Descriptor: | CARBOXY-TERMINAL PROCESSING PROTEASE CTPB, PEPTIDE1, PEPTIDE2 | | Authors: | Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T. | | Deposit date: | 2013-08-17 | | Release date: | 2013-12-04 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
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4C2G
 | | Crystal structure of CtpB(S309A) in complex with a peptide having a Val-Pro-Ala C-terminus | | Descriptor: | CARBOXY-TERMINAL PROCESSING PROTEASE CTPB, PEPTIDE1 | | Authors: | Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T. | | Deposit date: | 2013-08-17 | | Release date: | 2013-12-04 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
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4FET
 | | Catalytic domain of germination-specific lytic tansglycosylase SleB from Bacillus anthracis | | Descriptor: | SODIUM ION, Spore cortex-lytic enzyme prepeptide | | Authors: | Jing, X, Heffron, J, Popham, D.L, Schubot, F.D. | | Deposit date: | 2012-05-30 | | Release date: | 2012-07-25 | | Last modified: | 2017-11-15 | | Method: | X-RAY DIFFRACTION (1.909 Å) | | Cite: | The catalytic domain of the germination-specific lytic transglycosylase SleB from Bacillus anthracis displays a unique active site topology.
Proteins, 80, 2012
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4C2H
 | | Crystal structure of the CtpB(V118Y) mutant | | Descriptor: | CARBOXY-TERMINAL PROCESSING PROTEASE CTPB | | Authors: | Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T. | | Deposit date: | 2013-08-17 | | Release date: | 2013-12-04 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
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5TV7
 | | 2.05 Angstrom Resolution Crystal Structure of Peptidoglycan-Binding Protein from Clostridioides difficile in Complex with Glutamine Hydroxamate. | | Descriptor: | GLUTAMINE HYDROXAMATE, Putative peptidoglycan-binding/hydrolysing protein | | Authors: | Minasov, G, Wawrzak, Z, Shuvalova, L, Winsor, J, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) | | Deposit date: | 2016-11-08 | | Release date: | 2016-12-14 | | Method: | X-RAY DIFFRACTION (2.05 Å) | | Cite: | 2.05 Angstrom Resolution Crystal Structure of Peptidoglycan-Binding Protein from Clostridioides difficile in Complex with Glutamine Hydroxamate.
To Be Published
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5AO7
 | | Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide | | Descriptor: | 2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... | | Authors: | Dominguez-Gil, T, Hermoso, J.A. | | Deposit date: | 2015-09-09 | | Release date: | 2016-07-20 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.09 Å) | | Cite: | Turnover of Bacterial Cell Wall by Sltb3, a Multidomain Lytic Transglycosylase of Pseudomonas Aeruginosa.
Acs Chem.Biol., 11, 2016
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1SU3
 | | X-ray structure of human proMMP-1: New insights into collagenase action | | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... | | Authors: | Jozic, D, Bourenkov, G, Lim, N.H, Nagase, H, Bode, W, Maskos, K, Structural Proteomics in Europe (SPINE) | | Deposit date: | 2004-03-26 | | Release date: | 2004-12-21 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | X-ray structure of human proMMP-1: new insights into procollagenase activation and collagen binding.
J.Biol.Chem., 280, 2005
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5AO8
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7AJ9
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4C2F
 | | Crystal structure of the CtpB R168A mutant present in an active conformation | | Descriptor: | CARBOXY-TERMINAL PROCESSING PROTEASE CTPB, PEPTIDE1, PEPTIDE2 | | Authors: | Mastny, M, Heuck, A, Kurzbauer, R, Clausen, T. | | Deposit date: | 2013-08-17 | | Release date: | 2013-12-04 | | Last modified: | 2023-12-20 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Ctpb Assembles a Gated Protease Tunnel Regulating Cell-Cell Signaling During Spore Formation in Bacillus Subtilis.
Cell(Cambridge,Mass.), 155, 2013
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4NSO
 | | Crystal structure of the effector-immunity protein complex | | Descriptor: | Effector protein, Immunity protein | | Authors: | Dong, C. | | Deposit date: | 2013-11-28 | | Release date: | 2014-04-16 | | Last modified: | 2014-06-11 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Structural basis for recognition of the type VI spike protein VgrG3 by a cognate immunity protein.
Febs Lett., 588, 2014
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4FVL
 | | Human collagenase 3 (MMP-13) full form with peptides from pro-domain | | Descriptor: | CALCIUM ION, CHLORIDE ION, Collagenase 3, ... | | Authors: | Stura, E.A, Vera, L, Visse, R, Nagase, H, Dive, V. | | Deposit date: | 2012-06-29 | | Release date: | 2013-08-21 | | Last modified: | 2023-09-13 | | Method: | X-RAY DIFFRACTION (2.436 Å) | | Cite: | Crystal structure of full-length human collagenase 3 (MMP-13) with peptides in the active site defines exosites in the catalytic domain.
Faseb J., 27, 2013
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3BKH
 | | Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144 | | Descriptor: | NICKEL (II) ION, SULFATE ION, lytic transglycosylase | | Authors: | Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G. | | Deposit date: | 2007-12-06 | | Release date: | 2008-01-08 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
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4G0D
 | | Human collagenase 3 (MMP-13) full form with peptides from pro-domain | | Descriptor: | CALCIUM ION, CHLORIDE ION, Collagenase 3, ... | | Authors: | Stura, E.A, Vera, L, Visse, R, Nagase, H, Dive, V. | | Deposit date: | 2012-07-09 | | Release date: | 2013-08-21 | | Last modified: | 2023-09-13 | | Method: | X-RAY DIFFRACTION (2.54 Å) | | Cite: | Crystal structure of full-length human collagenase 3 (MMP-13) with peptides in the active site defines exosites in the catalytic domain.
Faseb J., 27, 2013
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