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4USC
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BU of 4usc by Molmil
Crystal structure of peroxidase from palm tree Chamaerops excelsa
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Bernardes, A, Santos, J.C, Textor, L.C, Cuadrado, N.H, Kostetsky, E.Y, Roig, M.G, Muniz, J.R.C, Shnyrov, V.L, Polikarpov, I.
Deposit date:2014-07-07
Release date:2015-05-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure Analysis of Peroxidase from the Palm Tree Chamaerops Excelsa.
Biochimie, 111, 2015
4CVJ
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BU of 4cvj by Molmil
Neutron Structure of Compound I intermediate of Cytochrome c Peroxidase - Deuterium exchanged 100 K
Descriptor: CYTOCHROME C PEROXIDASE, MITOCHONDRIAL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Casadei, C.M, Gumiero, A, Blakeley, M.P, Ostermann, A, Raven, E.L, Moody, P.C.E.
Deposit date:2014-03-27
Release date:2014-07-16
Last modified:2024-05-08
Method:NEUTRON DIFFRACTION (2.182 Å), X-RAY DIFFRACTION
Cite:Neutron Cryo-Crystallography Captures the Protonation State of Ferryl Heme in a Peroxidase
Science, 345, 2014
3RIW
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BU of 3riw by Molmil
The Crystal Structure of Leishmania major Peroxidase mutant C197T
Descriptor: Ascorbate peroxidase, CALCIUM ION, POTASSIUM ION, ...
Authors:Jasion, V.S, Li, H, Poulos, T.L.
Deposit date:2011-04-14
Release date:2011-05-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal Structure of Leishmania major Peroxidase and Characterization of the Compound I Tryptophan Radical.
J.Biol.Chem., 286, 2011
2XIF
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BU of 2xif by Molmil
The structure of ascorbate peroxidase Compound II
Descriptor: ASCORBATE PEROXIDASE, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2010-06-29
Release date:2010-07-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
7S10
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BU of 7s10 by Molmil
Crystal Structure of ascorbate peroxidase triple mutant: S160M, L203M, Q204M
Descriptor: L-ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Poulos, T.L, Kim, J, Murarka, V.C.
Deposit date:2021-08-31
Release date:2022-09-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.40000689 Å)
Cite:Computational analysis of the tryptophan cation radical energetics in peroxidase Compound I.
J.Biol.Inorg.Chem., 27, 2022
6H08
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BU of 6h08 by Molmil
The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a His175Me-His proximal ligand substitution
Descriptor: COBALT (II) ION, Cytochrome c peroxidase, mitochondrial, ...
Authors:Ortmayer, M, Levy, C, Green, A.P.
Deposit date:2018-07-06
Release date:2020-02-12
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rewiring the "Push-Pull" Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code.
Acs Catalysis, 10, 2020
6XV4
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BU of 6xv4 by Molmil
Neutron structure of ferric ascorbate peroxidase-ascorbate complex
Descriptor: ASCORBIC ACID, Ascorbate peroxidase, POTASSIUM ION, ...
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2020-01-21
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
6TAE
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BU of 6tae by Molmil
Neutron structure of ferric ascorbate peroxidase
Descriptor: Ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2019-10-29
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
7JZ6
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BU of 7jz6 by Molmil
The Cryo-EM structure of the Catalase-peroxidase from Escherichia coli
Descriptor: Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Su, C.-C.
Deposit date:2020-09-01
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
3HDL
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BU of 3hdl by Molmil
Crystal Structure of Highly Glycosylated Peroxidase from Royal Palm Tree
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Watanabe, L, Moura, P.R, Bleicher, L, Nascimento, A.S, Zamorano, L.S, Calvete, J.J, Bursakov, S, Roig, M.G, Shnyrov, V.L, Polikarpov, I.
Deposit date:2009-05-07
Release date:2009-11-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and statistical coupling analysis of highly glycosylated peroxidase from royal palm tree (Roystonea regia).
J.Struct.Biol., 169, 2010
1QGJ
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BU of 1qgj by Molmil
ARABIDOPSIS THALIANA PEROXIDASE N
Descriptor: CALCIUM ION, GLUTATHIONE, PEROXIDASE N, ...
Authors:Mirza, O, Oestergaard, L, Welinder, K.G, Henriksen, A, Gajhede, M.
Deposit date:1999-04-29
Release date:2000-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Arabidopsis thaliana peroxidase N: structure of a novel neutral peroxidase.
Acta Crystallogr.,Sect.D, 56, 2000
7AG8
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BU of 7ag8 by Molmil
Cryo-EM structure of wild-type KatG from M. tuberculosis
Descriptor: Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Blundell, T.L, Chaplin, A.K, Munir, A.
Deposit date:2020-09-21
Release date:2021-01-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Using cryo-EM to understand antimycobacterial resistance in the catalase-peroxidase (KatG) from Mycobacterium tuberculosis.
Structure, 29, 2021
7ATJ
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BU of 7atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A COMPLEX WITH CYANIDE AND FERULIC ACID
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CALCIUM ION, CYANIDE ION, ...
Authors:Henriksen, A, Smith, A.T, Gajhede, M.
Deposit date:1999-04-26
Release date:2000-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.
J.Biol.Chem., 274, 1999
7OPT
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BU of 7opt by Molmil
Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: Ascorbate peroxidase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
7OQR
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BU of 7oqr by Molmil
Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: ACETATE ION, Ascorbate peroxidase, GLYCEROL, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-04
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
8DWR
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BU of 8dwr by Molmil
Crystal structure of the L333V variant of catalase-peroxidase from Mycobacterium tuberculosis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Diaz-Vilchis, A, Uribe-Vazquez, B, Avila-Linares, A, Rudino-Pinera, E, Soberon, X.
Deposit date:2022-08-01
Release date:2023-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of a catalase-peroxidase variant (L333V-KatG) identified in an INH-resistant Mycobacterium tuberculosis clinical isolate.
Biochem Biophys Rep, 37, 2024
6MPY
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BU of 6mpy by Molmil
B. pseudomallei KatG crystallized in the presence of benzoyl hydrazide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:B. pseudomallei KatG crystallized in the presence of benzoyl hydrazide
To be published
6MQ0
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BU of 6mq0 by Molmil
B. pseudomallei KatG crystallized in the presence of furoyl hydrazide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:B. pseudomallei KatG crystallized in the presence of furoyl hydrazide
To be published
6MQ1
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BU of 6mq1 by Molmil
B. pseudomallei KatG crystalized in the presence of ABTS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:B. pseudomallei KatG crystalized in the presence of ABTS
To be published
2AQD
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BU of 2aqd by Molmil
cytochrome c peroxidase (CCP) in complex with 2,5-diaminopyridine
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K.
Deposit date:2005-08-17
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Probing molecular docking in a charged model binding site.
J.Mol.Biol., 357, 2006
2AS2
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BU of 2as2 by Molmil
cytochrome c peroxidase in complex with 2-iminopiperidine
Descriptor: Cytochrome c peroxidase, mitochondrial, PIPERIDIN-2-IMINE, ...
Authors:Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K.
Deposit date:2005-08-22
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Probing molecular docking in a charged model binding site.
J.Mol.Biol., 357, 2006
8FF7
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BU of 8ff7 by Molmil
Cytosolic ascorbate peroxidase mutant from Panicum virgatum- ascorbate complex
Descriptor: ASCORBIC ACID, Cytosolic ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Zhang, B, Kang, C.
Deposit date:2022-12-07
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Activity of Cytosolic Ascorbate Peroxidase (APX) from Panicum virgatum against Ascorbate and Phenylpropanoids.
Int J Mol Sci, 24, 2023
8FF6
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BU of 8ff6 by Molmil
Cytosolic ascorbate peroxidase mutant from Panicum virgatum
Descriptor: Cytosolic ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Zhang, B, Kang, C.
Deposit date:2022-12-07
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Activity of Cytosolic Ascorbate Peroxidase (APX) from Panicum virgatum against Ascorbate and Phenylpropanoids.
Int J Mol Sci, 24, 2023
6ATJ
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BU of 6atj by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C COMPLEX WITH FERULIC ACID
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, CALCIUM ION, PEROXIDASE C1A, ...
Authors:Henriksen, A, Smith, A.T, Gajhede, M.
Deposit date:1999-04-23
Release date:2000-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.
J.Biol.Chem., 274, 1999
6B9B
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BU of 6b9b by Molmil
Crystal structure of the catalase-peroxidase from B. pseudomallei with maltose bound
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2017-10-10
Release date:2018-07-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:KatG-Mediated Oxidation Leading to Reduced Susceptibility of Bacteria to Kanamycin.
ACS Omega, 3, 2018

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