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5FLH
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BU of 5flh by Molmil
Free state of Ni-quercetinase
Descriptor: DIMETHYL SULFOXIDE, NICKEL (II) ION, NITRATE ION, ...
Authors:Jeoung, J.-H, Nianios, D, Fetzner, S, Dobbek, H.
Deposit date:2015-10-26
Release date:2016-06-01
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Quercetin 2,4-Dioxygenase Activates Dioxygen in a Side-on O2 -Ni Complex.
Angew.Chem.Int.Ed.Engl., 55, 2016
5FLJ
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BU of 5flj by Molmil
enzyme-substrate-dioxygen complex of Ni-quercetinase
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, DIMETHYL SULFOXIDE, NICKEL (II) ION, ...
Authors:Jeoung, J.-H, Nianios, D, Fetzner, S, Dobbek, H.
Deposit date:2015-10-26
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.818 Å)
Cite:Quercetin 2,4-Dioxygenase Activates Dioxygen in a Side-on O2 -Ni Complex.
Angew.Chem.Int.Ed.Engl., 55, 2016
5FQ0
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BU of 5fq0 by Molmil
The structure of KdgF from Halomonas sp.
Descriptor: CITRATE ANION, KDGF, NICKEL (II) ION, ...
Authors:Hobbs, J.K, Lee, S.M, Robb, M, Hof, F, Barr, C, Abe, K.T, Hehemann, J.H, McLean, R, Abbott, D.W, Boraston, A.B.
Deposit date:2015-12-03
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kdgf, the Missing Link in the Microbial Metabolism of Uronate Sugars from Pectin and Alginate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5FPZ
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BU of 5fpz by Molmil
The structure of KdgF from Yersinia enterocolitica with malonate bound in the active site.
Descriptor: MALONIC ACID, NICKEL (II) ION, PECTIN DEGRADATION PROTEIN
Authors:Hobbs, J.K, Lee, S.M, Robb, M, Hof, F, Barr, C, Abe, K.T, Hehemann, J.H, McLean, R, Abbott, D.W, Boraston, A.B.
Deposit date:2015-12-03
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Kdgf, the Missing Link in the Microbial Metabolism of Uronate Sugars from Pectin and Alginate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5FPX
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BU of 5fpx by Molmil
The structure of KdgF from Yersinia enterocolitica.
Descriptor: NICKEL (II) ION, PECTIN DEGRADATION PROTEIN, PEPTIDE
Authors:Hobbs, J.K, Lee, S.M, Robb, M, Hof, F, Barr, C, Abe, K.T, Hehemann, J.H, McLean, R, Abbott, D.W, Boraston, A.B.
Deposit date:2015-12-03
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Kdgf, the Missing Link in the Microbial Metabolism of Uronate Sugars from Pectin and Alginate.
Proc.Natl.Acad.Sci.USA, 113, 2016
5J4F
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BU of 5j4f by Molmil
Crystal structure of the N-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.-W, Lee, W.-C, Kim, H.Y, Kim, J.-H, Won, H.-S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
5J4G
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BU of 5j4g by Molmil
Crystal structure of the C-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.W, Lee, W.C, Kim, H.Y, Kim, J.H, Won, H.S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
5J7M
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BU of 5j7m by Molmil
Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
Descriptor: ACETATE ION, Cupin 2 conserved barrel domain protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Cuff, M, Chhor, G, Endres, M, Joachimiak, A.
Deposit date:2016-04-06
Release date:2016-04-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
To Be Published
5TFZ
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BU of 5tfz by Molmil
Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with nickel and diacrylate
Descriptor: 3-(acryloyloxy)propanoic acid, DI(HYDROXYETHYL)ETHER, NICKEL (II) ION, ...
Authors:Schnicker, N.J, Dey, M.
Deposit date:2016-09-27
Release date:2017-06-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter.
Biochemistry, 56, 2017
5TG0
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BU of 5tg0 by Molmil
Crystal structure of the dimethylsulfoniopropionate (DMSP) lyase DddK complexed with iron and zinc
Descriptor: FE (III) ION, ZINC ION, dimethylsulfoniopropionate lyase DddK
Authors:Schnicker, N.J, Dey, M.
Deposit date:2016-09-27
Release date:2017-06-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter.
Biochemistry, 56, 2017
5U55
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BU of 5u55 by Molmil
Psf4 in complex with Mn2+ and (S)-2-HPP
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5U5D
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BU of 5u5d by Molmil
Psf4 in complex with Mn2+ and (R)-2-HPP
Descriptor: (S)-2-hydroxypropylphosphonic acid epoxidase, MANGANESE (II) ION, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5U58
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BU of 5u58 by Molmil
Psf4 in complex with Fe2+ and (R)-2-HPP
Descriptor: (S)-2-hydroxypropylphosphonic acid epoxidase, FE (III) ION, [(2R)-2-hydroxypropyl]phosphonic acid
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5U57
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BU of 5u57 by Molmil
Psf4 in complex with Fe2+ and (S)-2-HPP
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, (S)-2-hydroxypropylphosphonic acid epoxidase, FE (III) ION
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2016-12-06
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Characterization of Two Late-Stage Enzymes Involved in Fosfomycin Biosynthesis in Pseudomonads.
ACS Chem. Biol., 12, 2017
5WSF
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BU of 5wsf by Molmil
Crystal structure of a cupin protein (tm1459) in osmium (Os)-substituted form II
Descriptor: OSMIUM ION, Uncharacterized protein tm1459
Authors:Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2016-12-06
Release date:2017-05-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
5WSD
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BU of 5wsd by Molmil
Crystal structure of a cupin protein (tm1459) in apo form
Descriptor: Uncharacterized protein tm1459
Authors:Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2016-12-06
Release date:2017-05-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
5WSE
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BU of 5wse by Molmil
Crystal structure of a cupin protein (tm1459) in osmium (Os) substituted form I
Descriptor: OSMIUM ION, Uncharacterized protein tm1459
Authors:Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2016-12-06
Release date:2017-05-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase
J. Am. Chem. Soc., 2017
5UQP
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BU of 5uqp by Molmil
The crystal structure of cupin protein from Rhodococcus jostii RHA1
Descriptor: CHLORIDE ION, Cupin, SULFATE ION, ...
Authors:Tan, K, Li, H, Clancy, S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2017-02-08
Release date:2017-02-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of cupin protein from Rhodococcus jostii RHA1
To Be Published
6B8W
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BU of 6b8w by Molmil
1.9 Angstrom Resolution Crystal Structure of Cupin_2 Domain (pfam 07883) of XRE Family Transcriptional Regulator from Enterobacter cloacae.
Descriptor: MANGANESE (II) ION, THIOCYANATE ION, XRE family transcriptional regulator
Authors:Minasov, G, Wawrzak, Z, Skarina, T, McChesney, C, Grimshaw, S, Sandoval, J, Satchell, K.J.F, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-10-09
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 Angstrom Resolution Crystal Structure of Cupin_2 Domain (pfam 07883) of XRE Family Transcriptional Regulator from Enterobacter cloacae.
To Be Published
6A55
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BU of 6a55 by Molmil
Crystal structure of DddK mutant Y122A
Descriptor: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
6A54
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BU of 6a54 by Molmil
Crystal structure of DddK mutant Y64A
Descriptor: MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
6A53
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BU of 6a53 by Molmil
Crystal structure of DddK
Descriptor: MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
6L2F
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BU of 6l2f by Molmil
Crystal structure of a cupin protein (tm1459, H54AH58A mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, COPPER (II) ION, ...
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L2E
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BU of 6l2e by Molmil
Crystal structure of a cupin protein (tm1459, H52A mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin_2 domain-containing protein
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L2D
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BU of 6l2d by Molmil
Crystal structure of a cupin protein (tm1459) in copper (Cu) substituted form
Descriptor: COPPER (II) ION, Cupin_2 domain-containing protein
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020

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