PDB: 34 resultsInfo pagesStatus searchChemie searchBIRD

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4M17	Crystal Structure of Surfactant Protein-D D325A/R343V mutant Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D Authors: Goh, B.C, Rynkiewicz, M.J, Cafarella, T.R, White, M.R, Hartshorn, K.L, Allen, K, Crouch, E.C, Calin, O, Seeberger, P.H, Schulten, K, Seaton, B.A. Deposit date: 2013-08-02 Release date: 2013-12-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.096 Å) Cite: Molecular mechanisms of inhibition of influenza by surfactant protein d revealed by large-scale molecular dynamics simulation. Biochemistry, 52, 2013
6BBD	Structure of N-glycosylated porcine surfactant protein-D complexed with glycerol Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ... Authors: van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P. Deposit date: 2017-10-18 Release date: 2018-05-23 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.898 Å) Cite: Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus. J. Biol. Chem., 293, 2018
6BBE	Structure of N-glycosylated porcine surfactant protein-D Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P. Deposit date: 2017-10-18 Release date: 2018-05-23 Last modified: 2021-03-24 Method: X-RAY DIFFRACTION (1.898 Å) Cite: Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus. J. Biol. Chem., 293, 2018
5OXS	Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand Salmonella enterica Minnesota R5 oligosaccharide Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-glucopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-5)-4,7-anhydro-3-deoxy-D-gluco-oct-2-ulosonic acid Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2017-09-07 Release date: 2018-06-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural definition of hSP-D recognition of Salmonella enterica LPS inner core oligosaccharides reveals alternative binding modes for the same LPS. PLoS ONE, 13, 2018
5OXR	Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand Salmonella enterica Minnesota R7 oligosaccharide Descriptor: CALCIUM ION, L-glycero-alpha-D-manno-heptopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-5)-4,7-anhydro-3-deoxy-D-gluco-oct-2-ulosonic acid, Pulmonary surfactant-associated protein D Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2017-09-07 Release date: 2018-06-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural definition of hSP-D recognition of Salmonella enterica LPS inner core oligosaccharides reveals alternative binding modes for the same LPS. PLoS ONE, 13, 2018
6RYG	native structure of conglutinin carbohydrate recognition domain Descriptor: CALCIUM ION, Conglutinin Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2019-06-10 Release date: 2019-10-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (0.974 Å) Cite: Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019
6RYM	Structure of carbohydrate recognition domain with GlcNAc bound Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2019-06-10 Release date: 2019-10-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019
6RYN	Structure of conglutinin carbohydrate recognition domain with GlcNAc-alpha-1-phosphate bound Descriptor: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, CALCIUM ION, Conglutinin Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2019-06-10 Release date: 2019-10-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1 Å) Cite: Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019
6RYJ	structure of conglutinin carbohydrate recognition domain with ethylene glycol bound Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Conglutinin Authors: Shrive, A.K, Greenhough, T.J. Deposit date: 2019-06-10 Release date: 2019-10-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019

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