PDB: 661 resultsInfo pagesStatus searchChemie searchBIRD

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5HFD	The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) Descriptor: Disks large homolog 4 Authors: White, K.I, Raman, A.S, Ranganathan, R. Deposit date: 2016-01-06 Release date: 2017-01-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.6 Å) Cite: The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) To Be Published
1NTE	CRYSTAL STRUCTURE ANALYSIS OF THE SECOND PDZ DOMAIN OF SYNTENIN Descriptor: OXYGEN ATOM, Syntenin 1 Authors: Kang, B.S, Cooper, D.R, Devedjiev, Y, Derewenda, U, Derewenda, Z.S. Deposit date: 2003-01-29 Release date: 2003-07-15 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.24 Å) Cite: Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm. Structure, 11, 2003
1MFG	The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor Descriptor: Erb-B2 INTERACTING PROTEIN, Erb-B2 carboxyl-terminal fragment Authors: Birrane, G, Chung, J, Ladias, J.A. Deposit date: 2002-08-10 Release date: 2003-01-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Novel mode of ligand recognition by the erbin PDZ domain J.Biol.Chem., 278, 2003
1MFL	The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor Descriptor: Erb-B2 INTERACTING PROTEIN, PHOSPHORYLATED Erb-B2 carboxyl-terminal fragment. Authors: Birrane, G, Chung, J, Ladias, J.A. Deposit date: 2002-08-12 Release date: 2003-01-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Novel mode of ligand recognition by the erbin PDZ domain J.Biol.Chem., 278, 2003
1MC7	Solution Structure of mDvl1 PDZ domain Descriptor: Segment polarity protein dishevelled homolog DVL-1 Authors: Wong, H.-C, Bourdelas, A, Shao, Y, Wu, D, Shi, D.L, Zheng, J. Deposit date: 2002-08-05 Release date: 2003-09-23 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Direct binding of the PDZ domain of Dishevelled to a conserved internal sequence in the C-terminal region of Frizzled Mol.Cell, 12, 2003
1Q7X	Solution structure of the alternatively spliced PDZ2 domain (PDZ2b) of PTP-Bas (hPTP1E) Descriptor: PDZ2b domain of PTP-Bas (hPTP1E) Authors: Kachel, N, Erdmann, K.S, Kremer, W, Wolff, P, Gronwald, W, Heumann, R, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE) Deposit date: 2003-08-20 Release date: 2003-12-02 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure determination and ligand interactions of the PDZ2b domain of PTP-Bas (hPTP1E): Splicing induced modulation of ligand specificity. J.Mol.Biol., 334, 2003
1QAU	UNEXPECTED MODES OF PDZ DOMAIN SCAFFOLDING REVEALED BY STRUCTURE OF NNOS-SYNTROPHIN COMPLEX Descriptor: NEURONAL NITRIC OXIDE SYNTHASE (RESIDUES 1-130) Authors: Hillier, B.J, Christopherson, K.S, Prehoda, K.E, Bredt, D.S, Lim, W.A. Deposit date: 1999-03-29 Release date: 1999-05-04 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex. Science, 284, 1999
4HOP	Crystal structure of the computationally designed NNOS-Syntrophin complex Descriptor: Alpha-1-syntrophin, Nitric oxide synthase, brain Authors: Harwood, I.M, Melero, C, Ollikainen, N, Kortemme, T. Deposit date: 2012-10-22 Release date: 2013-11-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.29 Å) Cite: Quantification of the transferability of a designed protein specificity switch reveals extensive epistasis in molecular recognition. Proc.Natl.Acad.Sci.USA, 111, 2014
4JOP	CFTR Associated Ligand (CAL) PDZ bound to HPV16 E6 oncoprotein C-terminal peptide (TRRETQL) Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, Protein E6 Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOK	CFTR Associated Ligand (CAL) PDZ domain bound to peptide Y-iCAL36 (ANSRYPTSII) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, Y-iCAL36 peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.09 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JL7	Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1 Descriptor: CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 Authors: Lu, G, Wu, Y, Jiang, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z. Deposit date: 2013-03-12 Release date: 2013-10-23 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.16 Å) Cite: Structural Insights into Neutrophilic Migration Revealed by the Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1. Plos One, 8, 2013
4JOE	CFTR Associated Ligand (CAL) PDZ domain bound to peptide A-iCAL36 (ANSRAPTSII) Descriptor: A-iCAL36 peptide, GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.14 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOH	CFTR Associated Ligand (CAL) PDZ domain bound to peptide H-iCAL36 (ANSRHPTSII) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, H-iCAL36 peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOG	CFTR Associated Ligand (CAL) PDZ domain bound to peptide V-iCAL36 (ANSRVPTSII) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, V-iCAL36 peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.465 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4K6Y	CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-Q (ANSRWQTSII) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-Q peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-04-16 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4K76	CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-TRL (ANSRWPTTRL) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-TRL peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-04-16 Release date: 2014-02-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4K72	CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-VQD (ANSRVQDSII) Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-VQD peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-04-16 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4GVC	Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with phosphorylated Syndecan1 Peptide Descriptor: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ... Authors: Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J. Deposit date: 2012-08-30 Release date: 2013-03-13 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.54 Å) Cite: The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. Structure, 21, 2013
4JOF	CFTR Associated Ligand (CAL) PDZ domain bound to peptide L-iCAL36 (ANSRLPTSII) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, L-iCAL36 peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOR	CFTR Associated Ligand (CAL) PDZ domain bound to HPV18 E6 oncoprotein C-terminal peptide (RLQRRRETQV) Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, Protein E6 Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.34 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4K78	CFTR Associated Ligand (CAL) E317A PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL) Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-QDTRL peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-04-16 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4K75	CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL) Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-QDTRL peptide Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-04-16 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4JOJ	CFTR Associated Ligand (CAL) domain bound to peptide F-iCAL36 (ANSRFPTSII) Descriptor: F-iCAL36 peptide, GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein Authors: Amacher, J.F, Madden, D.R. Deposit date: 2013-03-18 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses. Structure, 22, 2014
4LMM	Crystal structure of NHERF1 PDZ1 domain complexed with the CXCR2 C-terminal tail in P21 space group Descriptor: ACETIC ACID, CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1 Authors: Jiang, Y, Lu, G, Wu, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z. Deposit date: 2013-07-10 Release date: 2014-01-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.1 Å) Cite: New Conformational State of NHERF1-CXCR2 Signaling Complex Captured by Crystal Lattice Trapping. Plos One, 8, 2013
4NXP	Crystal Structure of Free T-cell Lymphoma Invasion and Metastasis-1 PDZ Domain Quadruple Mutant (QM) Descriptor: T-lymphoma invasion and metastasis-inducing protein 1 Authors: Liu, X, Speckhard, D.C, Shepherd, T.R, Hengel, S.R, Fuentes, E.J. Deposit date: 2013-12-09 Release date: 2015-05-13 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Distinct Roles for Conformational Dynamics in Protein-Ligand Interactions. Structure, 24, 2016

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