PDB: 137 件ウェブページステータス検索Chemie searchBIRD

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4ZGV	The Crystal Structure of the Ferredoxin Receptor FusA from Pectobacterium atrosepticum SCRI1043 分子名称: Ferredoxin receptor, LAURYL DIMETHYLAMINE-N-OXIDE, octyl beta-D-glucopyranoside 著者 Grinter, R, Josts, I, Roszak, A.W, Cogdell, R.J, Walker, D. 登録日 2015-04-24 公開日 2016-08-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of the bacterial plant-ferredoxin receptor FusA. Nat Commun, 7, 2016
6OFR	The crystal structure of the outer membrane transporter YddB from Escherichia coli 分子名称: GLYCEROL, MAGNESIUM ION, TonB-dependent outer membrane receptor, ... 著者 Grinter, R. 登録日 2019-04-01 公開日 2019-10-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Protease-associated import systems are widespread in Gram-negative bacteria. Plos Genet., 15, 2019
8P97	BtuB3G3 bound to cyanocobalamin with disordered EL8 分子名称: CYANOCOBALAMIN, Putative surface layer protein, TonB-dependent receptor 著者 Silale, A, Abellon-Ruiz, J, van den Berg, B. 登録日 2023-06-05 公開日 2023-08-16 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (2.75 Å) 主引用文献 BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
8P98	BtuB3G3 bound to cyanocobalamin with ordered EL8 分子名称: CYANOCOBALAMIN, Putative surface layer protein, Vitamin B12 transporter BtuB 著者 Silale, A, Abellon-Ruiz, J, van den Berg, B. 登録日 2023-06-05 公開日 2023-08-16 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
5FQ8	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-decanoyloxypropyl decanoate, BT_2262 (UNCHARACTERISED LIPOPROTEIN), ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
5FQ6	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: 3-decanoyloxypropyl decanoate, BT_2261, CALCIUM ION, ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
5FQ7	Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron 分子名称: BT_2261, BT_2262, BT_2263, ... 著者 Glenwright, A.J, Pothula, K.R, Chorev, D.S, Basle, A, Robinson, C.V, Kleinekathoefer, U, Bolam, D.N, van den Berg, B. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis for nutrient acquisition by dominant members of the human gut microbiota. Nature, 541, 2017
8AA4	SusC components of the dextran utilisation system (utilisome) 分子名称: SusC homolog 著者 White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. 登録日 2022-06-29 公開日 2023-06-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
3RGN	Crystal structure of spin-labeled BtuB W371R1 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ... 著者 Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S. 登録日 2011-04-08 公開日 2011-10-26 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular Origin of Electron Paramagnetic Resonance Line Shapes on β-Barrel Membrane Proteins: The Local Solvation Environment Modulates Spin-Label Configuration Biochemistry, 50, 2011
4EPA	The crystal structure of the ferric yersiniabactin uptake receptor FyuA from Yersinia pestis 分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Pesticin receptor 著者 Lukacik, P, Barnard, T.J, Buchanan, S.K. 登録日 2012-04-17 公開日 2012-06-20 最終更新日 2012-07-04 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural engineering of a phage lysin that targets Gram-negative pathogens. Proc.Natl.Acad.Sci.USA, 109, 2012
5M9B	Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, Ferric enterobactin receptor 著者 Moynie, L, Naismith, J.H. 登録日 2016-11-01 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model. Nat Commun, 10, 2019
8THE	Cryo-EM structure of Pseudomonas aeruginosa TonB-dependent transporter PhuR in complex with synthetic antibody and heme 分子名称: (2~{R},4~{R},5~{S},6~{S})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[[(2~{R},3~{S},4~{S},5~{R},6~{S})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{R},4~{R},5~{S},6~{S})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{S})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Heme/hemoglobin uptake outer membrane receptor PhuR, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Knejski, P, Erramilli, S.K, Kossiakoff, A.A. 登録日 2023-07-15 公開日 2024-01-31 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Chaperone-assisted cryo-EM structure of P. aeruginosa PhuR reveals molecular basis for heme binding. Structure, 32, 2024
2O5P	Crystal structure of the full length ferric pyoverdine outer membrane receptor FpvA of Pseudomonas aeruginosa in its apo form 分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, Ferripyoverdine receptor, PHOSPHATE ION 著者 Cobessi, D. 登録日 2006-12-06 公開日 2007-10-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 A beta strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif. Structure, 15, 2007
1UJW	Structure of the complex between BtuB and Colicin E3 Receptor binding domain 分子名称: 2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, 3-OXO-PENTADECANOIC ACID, ACETOACETIC ACID, ... 著者 Kurisu, G, Zakharov, S.D, Zhalnina, M.V, Bano, S, Eroukova, V.Y, Rokitskaya, T.I, Antonenko, Y.N, Wiener, M.C, Cramer, W.A. 登録日 2003-08-12 公開日 2003-11-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 The structure of BtuB with bound colicin E3 R-domain implies a translocon NAT.STRUCT.BIOL., 10, 2003
9C4O	Cryo-EM structure of PqqU with ligand PQQ 分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Pyrroloquinoline quinone transporter 著者 Munder, F, Venugopal, H, Grinter, R. 登録日 2024-06-04 公開日 2024-06-19 実験手法 ELECTRON MICROSCOPY (1.99 Å) 主引用文献 High-affinity PQQ import is widespread in Gram-negative bacteria. To Be Published
2YSU	Structure of the complex between BtuB and Colicin E2 receptor binding domain 分子名称: Colicin-E2, Vitamin B12 transporter btuB 著者 Cramer, W.A, Sharma, O, Yamashita, E. 登録日 2007-04-04 公開日 2007-06-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structure of the complex of the colicin E2 R-domain and its BtuB receptor. The outer membrane colicin translocon J.Biol.Chem., 282, 2007
6BPM	The crystal structure of the Ferric-Catecholate import receptor Fiu from K12 E. coli: Closed form (C21) 分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, Catecholate siderophore receptor Fiu, octyl beta-D-glucopyranoside 著者 Grinter, R. 登録日 2017-11-23 公開日 2018-11-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The structure of the bacterial iron-catecholate transporter Fiu suggests that it imports substrates via a two-step mechanism. J.Biol.Chem., 2019
7OBW	Crystal structure of the ferric enterobactin receptor (PfeA) from Pseudomonas aeruginosa in complex with TCV-L6 分子名称: FE (III) ION, Ferric enterobactin receptor, [4-[[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[[(2~{S})-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-[2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]ethanoylamino]propanoyl]amino]propanoyl]amino]methyl]-1,2,3-triazol-1-yl]methyl 4-[4-[(5~{S})-5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazine-1-carboxylate 著者 Moynie, L, Naismith, J.H. 登録日 2021-04-23 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa . Acs Infect Dis., 8, 2022
7NSU	ColicinE9 intact translocation complex 分子名称: Colicin-E9, Outer membrane protein F, Tol-Pal system protein TolB, ... 著者 Webby, M.N, Kleanthous, C, Lukoyanova, N, Housden, N.G. 登録日 2021-03-08 公開日 2021-08-11 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Porin threading drives receptor disengagement and establishes active colicin transport through Escherichia coli OmpF. Embo J., 40, 2021
1QFF	E. COLI FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) IN COMPLEX WITH BOUND FERRICHROME-IRON 分子名称: 2-AMINO-VINYL-PHOSPHATE, 3-HYDROXY-TETRADECANOIC ACID, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, ... 著者 Ferguson, A.D, Hofmann, E, Coulton, J.W, Diederichs, K, Welte, W. 登録日 1999-04-10 公開日 2000-07-26 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A conserved structural motif for lipopolysaccharide recognition by procaryotic and eucaryotic proteins. Structure Fold.Des., 8, 2000
1QKC	ESCHERICHIA COLI FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) IN COMPLEX DELTA TWO-ALBOMYCIN 分子名称: 3-HYDROXY-TETRADECANOIC ACID, DELTA-2-ALBOMYCIN A1, DIPHOSPHATE, ... 著者 Ferguson, A.D, Braun, V, Fiedler, H.-P, Coulton, J.W, Diederichs, K, Welte, W. 登録日 1999-07-18 公開日 2000-06-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of the antibiotic albomycin in complex with the outer membrane transporter FhuA. Protein Sci., 9, 2000
6R1F	Crystal structure of the ferric enterobactin receptor mutant R480A from Pseudomonas aeruginosa (PfeA) in complex with enterobactin 分子名称: FE (III) ION, Ferric enterobactin receptor, N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide) 著者 Moynie, L, Naismith, J.H. 登録日 2019-03-14 公開日 2019-04-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model. Nat Commun, 10, 2019
3M8D	Crystal structure of spin-labeled BtuB V10R1 with bound calcium and cyanocobalamin 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, CYANOCOBALAMIN, ... 著者 Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S. 登録日 2010-03-17 公開日 2010-09-15 最終更新日 2021-08-18 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Conformational exchange in a membrane transport protein is altered in protein crystals. Biophys.J., 99, 2010
1BY3	FHUA FROM E. COLI 分子名称: N-OCTYL-2-HYDROXYETHYL SULFOXIDE, PROTEIN (FERRICHROME-IRON RECEPTOR PRECURSOR (FHUA)) 著者 Locher, K.P, Rees, B, Koebnik, R, Mitschler, A, Moulinier, L, Rosenbusch, J.P, Moras, D. 登録日 1998-10-22 公開日 1999-01-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Transmembrane signaling across the ligand-gated FhuA receptor: crystal structures of free and ferrichrome-bound states reveal allosteric changes. Cell(Cambridge,Mass.), 95, 1998
1KMP	Crystal structure of the Outer Membrane Transporter FecA Complexed with Ferric Citrate 分子名称: CITRIC ACID, FE (III) ION, IRON(III) DICITRATE TRANSPORT PROTEIN FECA, ... 著者 Ferguson, A.D, Chakraborty, R, Smith, B.S, Esser, L, van der Helm, D, Deisenhofer, J. 登録日 2001-12-17 公開日 2002-03-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of gating by the outer membrane transporter FecA. Science, 295, 2002

 

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