PDB: 108 件ウェブページステータス検索Chemie searchBIRD

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5ZYP	Structure of the Yeast Ctr9/Paf1 complex 分子名称: NICKEL (II) ION, RNA polymerase-associated protein CTR9,RNA polymerase II-associated protein 1 著者 Xie, Y, Zheng, M, Zhou, H, Long, J. 登録日 2018-05-28 公開日 2018-09-26 最終更新日 2019-05-22 実験手法 X-RAY DIFFRACTION (2.532 Å) 主引用文献 Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation. Nat Commun, 9, 2018
5ZYQ	The Structure of Human PAF1/CTR9 complex 分子名称: RNA polymerase-associated protein CTR9 homolog,RNA polymerase II-associated factor 1 homolog 著者 Xie, Y, Zheng, M, Zhou, H, Long, J. 登録日 2018-05-28 公開日 2018-09-26 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.531 Å) 主引用文献 Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation. Nat Commun, 9, 2018
7DKH	Crystal structure of the Ctr9/Paf1/Cdc73/Rtf1 quaternary complex 分子名称: Cell division control protein 73, RNA polymerase II-associated protein 1, RNA polymerase-associated protein CTR9, ... 著者 Chen, F.L, Liu, B.B, Guo, L, Li, D.F, Zhou, H, Long, J.F. 登録日 2020-11-24 公開日 2021-11-24 最終更新日 2022-01-05 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal Structure of the Core Module of the Yeast Paf1 Complex. J.Mol.Biol., 434, 2021
4M6T	Structure of human Paf1 and Leo1 complex 分子名称: RNA polymerase II-associated factor 1 homolog, Linker, RNA polymerase-associated protein LEO1, ... 著者 Shen, Y, Qin, X. 登録日 2013-08-11 公開日 2013-10-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.498 Å) 主引用文献 Structural insights into Paf1 complex assembly and histone binding Nucleic Acids Res., 41, 2013
8J8Q	Structure of the four-component Paf1 complex from Saccharomyces eubayanus 分子名称: CDC73-like protein, CTR9-like protein, PAF1-like protein, ... 著者 Wang, Z, Qin, Y, Zhou, Y, Cao, Y. 登録日 2023-05-02 公開日 2023-05-24 最終更新日 2023-06-14 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus . Int J Mol Sci, 24, 2023
8J8P	Structure of the four-component Paf1 complex from Saccharomyces eubayanus 分子名称: CDC73-like protein, CTR9-like protein, PAF1-like protein, ... 著者 Wang, Z, Qin, Y, Zhou, Y, Cao, Y. 登録日 2023-05-02 公開日 2023-05-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus . Int J Mol Sci, 24, 2023
6AF0	Structure of Ctr9, Paf1 and Cdc73 ternary complex from Myceliophthora thermophila 分子名称: Cdc73 protein, Ctr9 protein, Paf1 protein 著者 Wang, Z, Deng, P, Zhou, Y. 登録日 2018-08-07 公開日 2018-09-19 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6IIW	Crystal structure of human UHRF1 PHD finger in complex with PAF15 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase UHRF1, PCNA-associated factor, ... 著者 Arita, K, Kori, S. 登録日 2018-10-07 公開日 2019-10-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.699 Å) 主引用文献 Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation. Nat Commun, 11, 2020
3V46	Crystal Structure of Yeast Cdc73 C-Terminal Domain 分子名称: Cell division control protein 73 著者 Amrich, C.G, VanDemark, A.P. 登録日 2011-12-14 公開日 2012-02-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.549 Å) 主引用文献 Cdc73 subunit of Paf1 complex contains C-terminal Ras-like domain that promotes association of Paf1 complex with chromatin. J.Biol.Chem., 287, 2012
6GMH	Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 分子名称: CDC73, CTR9,RNA polymerase-associated protein CTR9 homolog,RNA polymerase-associated protein CTR9 homolog, DNA-directed RNA polymerase II subunit RPB9, ... 著者 Vos, S.M, Farnung, L, Boehing, M, Linden, A, Wigge, C, Urlaub, H, Cramer, P. 登録日 2018-05-26 公開日 2018-08-22 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of activated transcription complex Pol II-DSIF-PAF-SPT6. Nature, 560, 2018
8A3Y	Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Farnung, L, Ochmann, M, Garg, G, Vos, S.M, Cramer, P. 登録日 2022-06-09 公開日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of a backtracked hexasomal intermediate of nucleosome transcription. Mol.Cell, 82, 2022
5E8B	Crystal structure of the S. cerevisiae Rtf1 histone modification domain mutant R126A 分子名称: BENZAMIDINE, RNA polymerase-associated protein RTF1, SODIUM ION 著者 Wier, A.D, Heroux, A, VanDemark, A.P. 登録日 2015-10-14 公開日 2016-11-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 The Histone Modification Domain of Paf1 Complex Subunit Rtf1 Directly Stimulates H2B Ubiquitylation through an Interaction with Rad6. Mol. Cell, 64, 2016
5EMX	Crystal structure of the S. cerevisiae Rtf1 histone modification domain mutant R124A R126A R128A 分子名称: RNA polymerase-associated protein RTF1 著者 Wier, A.D, Heroux, A, VanDemark, A.P. 登録日 2015-11-06 公開日 2016-10-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.399 Å) 主引用文献 The Histone Modification Domain of Paf1 Complex Subunit Rtf1 Directly Stimulates H2B Ubiquitylation through an Interaction with Rad6. Mol.Cell, 64, 2016
4L1P	Crystal Structure of Human Rtf1 Plus3 domain 分子名称: GLYCEROL, RNA polymerase-associated protein RTF1 homolog 著者 Wier, A.D, Heroux, A, VanDemark, A.P. 登録日 2013-06-03 公開日 2013-10-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin. Proc.Natl.Acad.Sci.USA, 110, 2013
4L1U	Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide 分子名称: GLYCEROL, RNA polymerase-associated protein RTF1 homolog, SULFATE ION, ... 著者 Wier, A.D, Heroux, A, VanDemark, A.P. 登録日 2013-06-03 公開日 2013-10-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.424 Å) 主引用文献 Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin. Proc.Natl.Acad.Sci.USA, 110, 2013
7UND	Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7UNC	Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... 著者 Filipovski, M, Vos, S.M, Farnung, L. 登録日 2022-04-10 公開日 2022-10-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of nucleosome retention during transcription elongation. Science, 376, 2022
7XN7	RNA polymerase II elongation complex containing Spt4/5, Elf1, Spt6, Spn1 and Paf1C 分子名称: Chromatin elongation factor SPT5, Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-04-28 公開日 2022-09-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7FAW	Structure of LW domain from Yeast 分子名称: Transcription elongation factor S-II 著者 Liao, S, Gao, J, Tu, X. 登録日 2021-07-07 公開日 2022-07-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.438 Å) 主引用文献 Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C. Int.J.Biol.Macromol., 253, 2023
7FAX	Complex structure of TbLeo1 and LW domain from Trypanosoma brucei 分子名称: TbLW, TbLeo1 peptide 著者 Liao, S, Gao, J, Tu, X. 登録日 2021-07-07 公開日 2022-07-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C. Int.J.Biol.Macromol., 253, 2023
7XGW	Apo structure of LW domain from Trypanosoma brucei 分子名称: Transcription elongation factor s-II 著者 Liao, S, Gao, J, Chen, M, Tu, X. 登録日 2022-04-06 公開日 2023-05-31 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C. Int.J.Biol.Macromol., 253, 2023
6TED	Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elongation activation by RTF1 分子名称: DNA (37-MER), DNA-directed RNA polymerase II subunit RPB9, DNA-directed RNA polymerase subunit, ... 著者 Vos, S.M, Farnung, L, Cramer, P. 登録日 2019-11-11 公開日 2020-07-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation. Nat.Struct.Mol.Biol., 27, 2020
7OOP	Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) 分子名称: DNA damage-binding protein 1, DNA excision repair protein ERCC-6, DNA excision repair protein ERCC-8, ... 著者 Kokic, G, Cramer, P. 登録日 2021-05-28 公開日 2021-10-06 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021
7OPD	Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) 分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ... 著者 Kokic, G, Cramer, P. 登録日 2021-05-31 公開日 2021-10-06 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021
7OPC	Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4) 分子名称: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ... 著者 Kokic, G, Cramer, P. 登録日 2021-05-31 公開日 2021-10-13 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021

 

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