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8YDX

Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.2 variant) in complex with CeSPIACE

Resources
File formatFile name (file size)
PDBx/mmCIF8ydx.cif.gz Display(597.79 KB)
8ydx.cif
PDBx/mmJSONall8ydx.json.gz Display (Tree)(381.01 KB)
8ydx.json
no-atom8ydx-noatom.json.gz Display (Header)(41.58 KB)
8ydx-noatom.json
add only8ydx-plus.json.gz Display(1.89 KB)
8ydx-plus.json
PDBMLall8ydx.xml.gz Display(818.09 KB)
8ydx.xml
no-atom8ydx-noatom.xml.gz Display(114.26 KB)
8ydx-noatom.xml
ext-atom8ydx-extatom.xml.gz Display(509.83 KB)
8ydx-extatom.xml
pdb_nextgenallpdb_00008ydx_xyz-enrich.cif.gz Display(670.48 KB)
pdb_00008ydx_xyz-enrich.cif
no-atompdb_00008ydx_xyz-no-atom-enrich.xml.gz Display(189.74 KB)
pdb_00008ydx_xyz-no-atom-enrich.xml
ng-only8ydx-plus.json.gz Display(12.48 KB)
8ydx-plus.json
PDBpdb8ydx.ent.gz Display(476.34 KB)
pdb8ydx.ent
RDF8ydx.rdf.gz Visualize(344.48 KB)
8ydx.rdf
Biological unit (mmCIF format)8ydx-assembly1.cif.gz Display(581.70 KB)
8ydx-assembly1.cif (D,F,E,C,B,...)

*author and software defined assembly, 6 molecule(s) (hexameric)

Biological unit (PDB format)8ydx.pdb1.gz Display(464.35 KB)
8ydx.pdb1 (D,F,E,C,B,...)

*author and software defined assembly, 6 molecule(s) (hexameric)

Validation reportsPDF8ydx_validation.pdf.gz Display(1.56 MB)
8ydx_validation.pdf
PDF-full8ydx_full_validation.pdf.gz Display(1.60 MB)
8ydx_full_validation.pdf
mmCIF8ydx_validation.cif.gz Display(150.38 KB)
8ydx_validation.cif
XML8ydx_validation.xml.gz Display(98.07 KB)
8ydx_validation.xml
PNG8ydx_multipercentile_validation.png.gz Display(126.92 KB)
8ydx_multipercentile_validation.png
SVG8ydx_multipercentile_validation.svg.gz Display(789.00 B)
8ydx_multipercentile_validation.svg

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PDB entries from 2026-03-04

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