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8YDX

Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.2 variant) in complex with CeSPIACE

Resources
File formatFile name (file size)
PDBx/mmCIF8ydx.cif.gz Display(597.44 KB)
8ydx.cif
PDBx/mmJSONall8ydx.json.gz Display (Tree)(380.42 KB)
8ydx.json
no-atom8ydx-noatom.json.gz Display (Header)(41.28 KB)
8ydx-noatom.json
add only8ydx-plus.json.gz Display(1.85 KB)
8ydx-plus.json
PDBMLall8ydx.xml.gz Display(817.49 KB)
8ydx.xml
no-atom8ydx-noatom.xml.gz Display(113.80 KB)
8ydx-noatom.xml
ext-atom8ydx-extatom.xml.gz Display(509.83 KB)
8ydx-extatom.xml
pdb_nextgenallpdb_00008ydx_xyz-enrich.cif.gz Display(670.01 KB)
pdb_00008ydx_xyz-enrich.cif
no-atompdb_00008ydx_xyz-no-atom-enrich.xml.gz Display(187.61 KB)
pdb_00008ydx_xyz-no-atom-enrich.xml
ng-only8ydx-plus.json.gz Display(12.49 KB)
8ydx-plus.json
PDBpdb8ydx.ent.gz Display(476.26 KB)
pdb8ydx.ent
RDF8ydx.rdf.gz Visualize(343.26 KB)
8ydx.rdf
Biological unit (mmCIF format)8ydx-assembly1.cif.gz Display(581.59 KB)
8ydx-assembly1.cif (D,F,E,C,B,...)

*author and software defined assembly, 6 molecule(s) (hexameric)

Biological unit (PDB format)8ydx.pdb1.gz Display(464.28 KB)
8ydx.pdb1 (D,F,E,C,B,...)

*author and software defined assembly, 6 molecule(s) (hexameric)

Validation reportsPDF8ydx_validation.pdf.gz Display(1.55 MB)
8ydx_validation.pdf
PDF-full8ydx_full_validation.pdf.gz Display(1.59 MB)
8ydx_full_validation.pdf
mmCIF8ydx_validation.cif.gz Display(146.93 KB)
8ydx_validation.cif
XML8ydx_validation.xml.gz Display(97.73 KB)
8ydx_validation.xml
PNG8ydx_multipercentile_validation.png.gz Display(126.75 KB)
8ydx_multipercentile_validation.png
SVG8ydx_multipercentile_validation.svg.gz Display(791.00 B)
8ydx_multipercentile_validation.svg

238895

PDB entries from 2025-07-16

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