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5YDM

The crystal structure of the Acyl Transferase domain of SpnD complex with benzylmalonyl

Resources
File formatFile name (file size)
PDBx/mmCIF5ydm.cif.gz Display(94.38 KB)
5ydm.cif
PDBx/mmJSONall5ydm.json.gz Display (Tree)(66.02 KB)
5ydm.json
no-atom5ydm-noatom.json.gz Display (Header)(15.98 KB)
5ydm-noatom.json
add only5ydm-plus.json.gz Display(610.00 B)
5ydm-plus.json
PDBMLall5ydm.xml.gz Display(123.87 KB)
5ydm.xml
no-atom5ydm-noatom.xml.gz Display(28.33 KB)
5ydm-noatom.xml
ext-atom5ydm-extatom.xml.gz Display(72.04 KB)
5ydm-extatom.xml
pdb_nextgenallpdb_00005ydm_xyz-enrich.cif.gz Display(103.51 KB)
pdb_00005ydm_xyz-enrich.cif
no-atompdb_00005ydm_xyz-no-atom-enrich.xml.gz Display(33.56 KB)
pdb_00005ydm_xyz-no-atom-enrich.xml
ng-only5ydm-plus.json.gz Display(3.17 KB)
5ydm-plus.json
PDBpdb5ydm.ent.gz Display(69.67 KB)
pdb5ydm.ent
RDF5ydm.rdf.gz Visualize(83.76 KB)
5ydm.rdf
Structure factorsr5ydmsf.ent.gz Display(417.18 KB)
r5ydmsf.ent
Biological unit (mmCIF format)5ydm-assembly1.cif.gz Display(82.79 KB)
5ydm-assembly1.cif (A)

*author and software defined assembly, 1 molecule(s) (monomeric)

Biological unit (PDB format)5ydm.pdb1.gz Display(64.49 KB)
5ydm.pdb1 (A)

*author and software defined assembly, 1 molecule(s) (monomeric)

Validation reportsPDF5ydm_validation.pdf.gz Display(442.21 KB)
5ydm_validation.pdf
PDF-full5ydm_full_validation.pdf.gz Display(446.90 KB)
5ydm_full_validation.pdf
mmCIF5ydm_validation.cif.gz Display(24.88 KB)
5ydm_validation.cif
XML5ydm_validation.xml.gz Display(17.55 KB)
5ydm_validation.xml
PNG5ydm_multipercentile_validation.png.gz Display(162.79 KB)
5ydm_multipercentile_validation.png
SVG5ydm_multipercentile_validation.svg.gz Display(975.00 B)
5ydm_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)5ydm_validation_2fo-fc_map_coef.cif.gz Display(450.70 KB)
5ydm_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)5ydm_validation_fo-fc_map_coef.cif.gz Display(446.37 KB)
5ydm_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)5ydm_validation_2fo-fc_map_coef.mtz Visualize(727.66 KB)
fo-fc (MTZ)5ydm_validation_fo-fc_map_coef.mtz Visualize(727.66 KB)

247536

PDB entries from 2026-01-14

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