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5YD4

Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A)

Resources
File formatFile name (file size)
PDBx/mmCIF5yd4.cif.gz Display(421.66 KB)
5yd4.cif
PDBx/mmJSONall5yd4.json.gz Display (Tree)(276.32 KB)
5yd4.json
no-atom5yd4-noatom.json.gz Display (Header)(19.95 KB)
5yd4-noatom.json
add only5yd4-plus.json.gz Display(1.18 KB)
5yd4-plus.json
PDBMLall5yd4.xml.gz Display(594.53 KB)
5yd4.xml
no-atom5yd4-noatom.xml.gz Display(50.85 KB)
5yd4-noatom.xml
ext-atom5yd4-extatom.xml.gz Display(190.91 KB)
5yd4-extatom.xml
pdb_nextgenallpdb_00005yd4_xyz-enrich.cif.gz Display(438.71 KB)
pdb_00005yd4_xyz-enrich.cif
no-atompdb_00005yd4_xyz-no-atom-enrich.xml.gz Display(57.36 KB)
pdb_00005yd4_xyz-no-atom-enrich.xml
ng-only5yd4-plus.json.gz Display(1.65 KB)
5yd4-plus.json
PDBpdb5yd4.ent.gz Display(345.74 KB)
pdb5yd4.ent
RDF5yd4.rdf.gz Visualize(136.08 KB)
5yd4.rdf
Structure factorsr5yd4sf.ent.gz Display(8.90 MB)
r5yd4sf.ent
Biological unit (mmCIF format)5yd4-assembly1.cif.gz Display(111.40 KB)
5yd4-assembly1.cif (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4-assembly2.cif.gz Display(111.35 KB)
5yd4-assembly2.cif (C,D)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4-assembly3.cif.gz Display(111.41 KB)
5yd4-assembly3.cif (E,F)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4-assembly4.cif.gz Display(103.18 KB)
5yd4-assembly4.cif (G,H)

*author and software defined assembly, 2 molecule(s) (dimeric)

Biological unit (PDB format)5yd4.pdb1.gz Display(89.98 KB)
5yd4.pdb1 (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4.pdb2.gz Display(89.79 KB)
5yd4.pdb2 (C,D)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4.pdb3.gz Display(90.05 KB)
5yd4.pdb3 (E,F)

*author and software defined assembly, 2 molecule(s) (dimeric)

5yd4.pdb4.gz Display(82.96 KB)
5yd4.pdb4 (G,H)

*author and software defined assembly, 2 molecule(s) (dimeric)

Validation reportsPDF5yd4_validation.pdf.gz Display(500.17 KB)
5yd4_validation.pdf
PDF-full5yd4_full_validation.pdf.gz Display(513.04 KB)
5yd4_full_validation.pdf
mmCIF5yd4_validation.cif.gz Display(67.94 KB)
5yd4_validation.cif
XML5yd4_validation.xml.gz Display(45.22 KB)
5yd4_validation.xml
PNG5yd4_multipercentile_validation.png.gz Display(166.54 KB)
5yd4_multipercentile_validation.png
SVG5yd4_multipercentile_validation.svg.gz Display(956.00 B)
5yd4_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)5yd4_validation_2fo-fc_map_coef.cif.gz Display(1.90 MB)
5yd4_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)5yd4_validation_fo-fc_map_coef.cif.gz Display(1.84 MB)
5yd4_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)5yd4_validation_2fo-fc_map_coef.mtz Visualize(4.57 MB)
fo-fc (MTZ)5yd4_validation_fo-fc_map_coef.mtz Visualize(4.57 MB)

249697

PDB entries from 2026-02-25

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