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5DI4

Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mn2+ at low pH

Resources
File formatFile name (file size)
PDBx/mmCIF5di4.cif.gz Display(64.29 KB)
5di4.cif
PDBx/mmJSONall5di4.json.gz Display (Tree)(43.50 KB)
5di4.json
no-atom5di4-noatom.json.gz Display (Header)(11.23 KB)
5di4-noatom.json
add only5di4-plus.json.gz Display(204.00 B)
5di4-plus.json
PDBMLall5di4.xml.gz Display(82.40 KB)
5di4.xml
no-atom5di4-noatom.xml.gz Display(17.22 KB)
5di4-noatom.xml
ext-atom5di4-extatom.xml.gz Display(47.97 KB)
5di4-extatom.xml
pdb_nextgenallpdb_00005di4_xyz-enrich.cif.gz Display(64.92 KB)
pdb_00005di4_xyz-enrich.cif
no-atompdb_00005di4_xyz-no-atom-enrich.xml.gz Display(17.24 KB)
pdb_00005di4_xyz-no-atom-enrich.xml
ng-only5di4-plus.json.gz Display(36.00 B)
5di4-plus.json
PDBpdb5di4.ent.gz Display(47.75 KB)
pdb5di4.ent
RDF5di4.rdf.gz Visualize(40.83 KB)
5di4.rdf
Structure factorsr5di4sf.ent.gz Display(185.93 KB)
r5di4sf.ent
Biological unit (mmCIF format)5di4-assembly1.cif.gz Display(52.94 KB)
5di4-assembly1.cif (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

Biological unit (PDB format)5di4.pdb1.gz Display(43.57 KB)
5di4.pdb1 (A,B)

*author and software defined assembly, 2 molecule(s) (dimeric)

Validation reportsPDF5di4_validation.pdf.gz Display(395.57 KB)
5di4_validation.pdf
PDF-full5di4_full_validation.pdf.gz Display(395.55 KB)
5di4_full_validation.pdf
mmCIF5di4_validation.cif.gz Display(4.73 KB)
5di4_validation.cif
XML5di4_validation.xml.gz Display(3.77 KB)
5di4_validation.xml
PNG5di4_multipercentile_validation.png.gz Display(130.64 KB)
5di4_multipercentile_validation.png
SVG5di4_multipercentile_validation.svg.gz Display(885.00 B)
5di4_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)5di4_validation_2fo-fc_map_coef.cif.gz Display(78.08 KB)
5di4_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)5di4_validation_fo-fc_map_coef.cif.gz Display(76.14 KB)
5di4_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)5di4_validation_2fo-fc_map_coef.mtz Visualize(187.82 KB)
fo-fc (MTZ)5di4_validation_fo-fc_map_coef.mtz Visualize(187.82 KB)

239149

PDB entries from 2025-07-23

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