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3D6M

Crystal structure of human caspase-1 with a naturally-occurring Lys319->Arg substitution in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)

Resources
File formatFile name (file size)
PDBx/mmCIF3d6m.cif.gz Display(73.47 KB)
3d6m.cif
PDBx/mmJSONall3d6m.json.gz Display (Tree)(51.40 KB)
3d6m.json
no-atom3d6m-noatom.json.gz Display (Header)(14.54 KB)
3d6m-noatom.json
add only3d6m-plus.json.gz Display(1.40 KB)
3d6m-plus.json
PDBMLall3d6m.xml.gz Display(98.36 KB)
3d6m.xml
no-atom3d6m-noatom.xml.gz Display(27.32 KB)
3d6m-noatom.xml
ext-atom3d6m-extatom.xml.gz Display(53.40 KB)
3d6m-extatom.xml
pdb_nextgenallpdb_00003d6m_xyz-enrich.cif.gz Display(80.77 KB)
pdb_00003d6m_xyz-enrich.cif
no-atompdb_00003d6m_xyz-no-atom-enrich.xml.gz Display(34.35 KB)
pdb_00003d6m_xyz-no-atom-enrich.xml
ng-only3d6m-plus.json.gz Display(2.42 KB)
3d6m-plus.json
PDBpdb3d6m.ent.gz Display(54.30 KB)
pdb3d6m.ent
RDF3d6m.rdf.gz Visualize(75.98 KB)
3d6m.rdf
Structure factorsr3d6msf.ent.gz Display(200.28 KB)
r3d6msf.ent
Biological unit (mmCIF format)3d6m-assembly1.cif.gz Display(118.32 KB)
3d6m-assembly1.cif (A,B,C)

*author and software defined assembly, 6 molecule(s) (hexameric)

Biological unit (PDB format)3d6m.pdb1.gz Display(94.47 KB)
3d6m.pdb1 (A,B,C)

*author and software defined assembly, 6 molecule(s) (hexameric)

Validation reportsPDF3d6m_validation.pdf.gz Display(439.75 KB)
3d6m_validation.pdf
PDF-full3d6m_full_validation.pdf.gz Display(441.18 KB)
3d6m_full_validation.pdf
mmCIF3d6m_validation.cif.gz Display(23.17 KB)
3d6m_validation.cif
XML3d6m_validation.xml.gz Display(17.27 KB)
3d6m_validation.xml
PNG3d6m_multipercentile_validation.png.gz Display(168.28 KB)
3d6m_multipercentile_validation.png
SVG3d6m_multipercentile_validation.svg.gz Display(976.00 B)
3d6m_multipercentile_validation.svg
EDMap2fo-fc (PDBx/mmCIF)3d6m_validation_2fo-fc_map_coef.cif.gz Display(451.09 KB)
3d6m_validation_2fo-fc_map_coef.cif
fo-fc (PDBx/mmCIF)3d6m_validation_fo-fc_map_coef.cif.gz Display(450.49 KB)
3d6m_validation_fo-fc_map_coef.cif
2fo-fc (MTZ)3d6m_validation_2fo-fc_map_coef.mtz Visualize(731.36 KB)
fo-fc (MTZ)3d6m_validation_fo-fc_map_coef.mtz Visualize(731.36 KB)

243083

PDB entries from 2025-10-15

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