9YXB
Babesia divergens ribosome structure by single-particle cryo-EM (3D class1, A-, P-, and E-site tRNAs and mRNA)
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
| site_id | PS00049 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrqrkawrrr.DGyfiyFedNagVI |
| Chain | Residue | Details |
| LK | ALA78-ILE104 |
| site_id | PS00051 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L39E Ribosomal protein L39e signature. KTdskIryNakrRYWRR |
| Chain | Residue | Details |
| Ll | LYS38-ARG54 |
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLvnsMMmhgrnnGKKlkairIVmhA |
| Chain | Residue | Details |
| SH | GLU58-ALA84 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrSLarS.GLkIgrieDvTPiPTD |
| Chain | Residue | Details |
| SO | LEU122-ASP144 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAyR |
| Chain | Residue | Details |
| SP | LYS62-ARG69 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPLS |
| Chain | Residue | Details |
| SU | GLY118-SER130 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqyinveIkpemVGyyIGEFsiT |
| Chain | Residue | Details |
| SW | ASN102-THR126 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGftSQvyAirqAiSKAV |
| Chain | Residue | Details |
| SL | GLY77-VAL95 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. MrkHMehnLnDkdSkfrLilLesrihrLarY |
| Chain | Residue | Details |
| ST | MET98-TYR128 |
| site_id | PS00467 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVTmNPvD |
| Chain | Residue | Details |
| LB | PRO197-ASP208 |
| site_id | PS00474 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. FgsnetiDvlGvTkGHGmkGvisR |
| Chain | Residue | Details |
| LC | PHE207-ARG230 |
| site_id | PS00475 |
| Number of Residues | 32 |
| Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGtGkMpqrp.LiVkarfFSklAekkIkeaG |
| Chain | Residue | Details |
| LM | LYS109-GLY140 |
| site_id | PS00526 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvlkCGkgrVWLDP |
| Chain | Residue | Details |
| LR | GLN19-PRO38 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCfnrhglirkyg.LSICRqCFR |
| Chain | Residue | Details |
| SS | ARG20-ARG42 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HmKRINaPshWlLdK |
| Chain | Residue | Details |
| SE | HIS14-LYS28 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM |
| Chain | Residue | Details |
| SG | ILE52-MET63 |
| site_id | PS00580 |
| Number of Residues | 21 |
| Details | RIBOSOMAL_L32E Ribosomal protein L32e signature. FrRfqsdRfkRVken..WRKpkG |
| Chain | Residue | Details |
| Lf | PHE17-GLY37 |
| site_id | PS00628 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PnhsclaSgkIiRtIVQqLE |
| Chain | Residue | Details |
| SX | PRO111-GLU130 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. MErRLqtkVFKlglAkSihhARcMI |
| Chain | Residue | Details |
| SD | MET105-ILE129 |
| site_id | PS00634 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. ILklFrLlQlhNgVfikmnkatseMLklInpYV |
| Chain | Residue | Details |
| Lc | ILE113-VAL145 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHywGlrTRGQ |
| Chain | Residue | Details |
| SR | ARG123-GLN136 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. VISAsrDkKLMIWEV |
| Chain | Residue | Details |
| Sg | VAL34-VAL48 | |
| Sg | ALA83-LEU97 | |
| Sg | ILE125-THR139 | |
| Sg | CYS212-MET226 |
| site_id | PS00700 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QcalVrnKdiRqFlDGIYVseK |
| Chain | Residue | Details |
| LF | GLN162-LYS183 |
| site_id | PS00712 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKrMRNkVAGFiTH |
| Chain | Residue | Details |
| SV | ILE41-HIS56 |
| site_id | PS00733 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH |
| Chain | Residue | Details |
| Sb | TYR73-HIS80 |
| site_id | PS00939 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L1E Ribosomal protein L1e signature. NlkeKrkALaAAVaATAvvplvmaRGH |
| Chain | Residue | Details |
| LD | ASN115-HIS141 |
| site_id | PS00961 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ETEREARrL |
| Chain | Residue | Details |
| Sd | GLU58-LEU66 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. IrMMLTCKVHIG |
| Chain | Residue | Details |
| SB | ILE18-GLY29 |
| site_id | PS00993 |
| Number of Residues | 21 |
| Details | RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. DLGTvcGKyfrvgcMaVlDaG |
| Chain | Residue | Details |
| Ld | ASP79-GLY99 |
| site_id | PS00996 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYIPRKCSA |
| Chain | Residue | Details |
| SY | LEU11-ALA19 |
| site_id | PS01077 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L37E Ribosomal protein L37e signature. GTgSfGlRngkt.HilCrRCG |
| Chain | Residue | Details |
| Lj | GLY7-GLY26 |
| site_id | PS01082 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CrkkeVPYciIkGKsrLG |
| Chain | Residue | Details |
| LH | CYS190-GLY207 |
| site_id | PS01104 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L13E Ribosomal protein L13e signature. RmGRGFTLqELkaaG |
| Chain | Residue | Details |
| LJ | ARG68-GLY82 |
| site_id | PS01105 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKIrRpHGngGtVrAsFrknLP |
| Chain | Residue | Details |
| Lg | GLY77-PRO98 |
| site_id | PS01145 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_L34E Ribosomal protein L34e signature. TkSnKqrvvKTPGG |
| Chain | Residue | Details |
| Lh | THR15-GLY28 |
| site_id | PS01171 |
| Number of Residues | 26 |
| Details | RIBOSOMAL_L21E Ribosomal protein L21e signature. GDyVdvlcdpsvhk.GmpYsyYhGkTG |
| Chain | Residue | Details |
| LT | GLY37-GLY62 |
| site_id | PS01172 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLKleC |
| Chain | Residue | Details |
| Lo | LYS62-CYS73 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkNRVfEiSLaDL |
| Chain | Residue | Details |
| SA | LEU61-LEU73 |
| site_id | PS01194 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRIkRG |
| Chain | Residue | Details |
| LN | ASP46-GLY69 |
| site_id | PS01257 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRrAFGKPnGvvARV |
| Chain | Residue | Details |
| LO | ALA108-VAL129 |
