9YOQ

Core module of ctSAGA

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000124	cellular_component	SAGA complex
A	0005634	cellular_component	nucleus
A	0006281	biological_process	DNA repair
A	0006355	biological_process	regulation of DNA-templated transcription
A	0035267	cellular_component	NuA4 histone acetyltransferase complex
B	0000124	cellular_component	SAGA complex
B	0003712	molecular_function	transcription coregulator activity
B	0006357	biological_process	regulation of transcription by RNA polymerase II
C	0000124	cellular_component	SAGA complex
C	0003712	molecular_function	transcription coregulator activity
C	0005634	cellular_component	nucleus
C	0006351	biological_process	DNA-templated transcription
C	0006357	biological_process	regulation of transcription by RNA polymerase II
C	0006366	biological_process	transcription by RNA polymerase II
D	0003743	molecular_function	translation initiation factor activity
D	0005634	cellular_component	nucleus
D	0005669	cellular_component	transcription factor TFIID complex
D	0006351	biological_process	DNA-templated transcription
D	0006367	biological_process	transcription initiation at RNA polymerase II promoter
D	0006413	biological_process	translational initiation
D	0016251	molecular_function	RNA polymerase II general transcription initiation factor activity
E	0000124	cellular_component	SAGA complex
E	0003713	molecular_function	transcription coactivator activity
E	0003743	molecular_function	translation initiation factor activity
E	0005634	cellular_component	nucleus
E	0005669	cellular_component	transcription factor TFIID complex
E	0006325	biological_process	chromatin organization
E	0006351	biological_process	DNA-templated transcription
E	0006367	biological_process	transcription initiation at RNA polymerase II promoter
E	0006413	biological_process	translational initiation
E	0010468	biological_process	regulation of gene expression
E	0010557	biological_process	positive regulation of macromolecule biosynthetic process
E	0016251	molecular_function	RNA polymerase II general transcription initiation factor activity
E	0045893	biological_process	positive regulation of DNA-templated transcription
E	0051123	biological_process	RNA polymerase II preinitiation complex assembly
G	0000124	cellular_component	SAGA complex
G	0005634	cellular_component	nucleus
G	0005669	cellular_component	transcription factor TFIID complex
G	0006351	biological_process	DNA-templated transcription
G	0006367	biological_process	transcription initiation at RNA polymerase II promoter
G	0016251	molecular_function	RNA polymerase II general transcription initiation factor activity
G	1990841	molecular_function	promoter-specific chromatin binding
H	0000124	cellular_component	SAGA complex
H	0003713	molecular_function	transcription coactivator activity
H	0005634	cellular_component	nucleus
H	0006351	biological_process	DNA-templated transcription
H	0006357	biological_process	regulation of transcription by RNA polymerase II
H	0045893	biological_process	positive regulation of DNA-templated transcription
I	0003677	molecular_function	DNA binding
I	0005634	cellular_component	nucleus
I	0005669	cellular_component	transcription factor TFIID complex
I	0006351	biological_process	DNA-templated transcription
I	0017025	molecular_function	TBP-class protein binding
I	0051123	biological_process	RNA polymerase II preinitiation complex assembly
Q	0000124	cellular_component	SAGA complex
Q	0006357	biological_process	regulation of transcription by RNA polymerase II
Q	0031048	biological_process	regulatory ncRNA-mediated heterochromatin formation
Q	1904802	biological_process	RITS complex assembly

Functional Information from PROSITE/UniProt

site_id	PS00633
Number of Residues	58
Details	BROMODOMAIN_1 Bromodomain signature. StpFlqrvSkreap..DYYtfIkqpMdlgtMtkklkslq..Ykskaefvydlnl.IwdNClkY

Chain	Residue	Details
K	SER353-TYR410

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site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGglDcTVRVWDI

Chain	Residue	Details
D	LEU639-ILE653

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site_id	PS00867
Number of Residues	8
Details	CPSASE_2 Carbamoyl-phosphate synthase subdomain signature 2. LNEVNVRA

Chain	Residue	Details
Q	LEU1094-ALA1101

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