9XA9
Cryo-EM structure of the pre-40S ribosome (Enp1-Rrp12 WT) from Chaetomium thermophilum, state Tsr1-1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 3 | 0005634 | cellular_component | nucleus |
| 3 | 0005730 | cellular_component | nucleolus |
| 3 | 0005737 | cellular_component | cytoplasm |
| b | 0005737 | cellular_component | cytoplasm |
| D | 0000028 | biological_process | ribosomal small subunit assembly |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006412 | biological_process | translation |
| D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0006412 | biological_process | translation |
| E | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0006412 | biological_process | translation |
| F | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0002181 | biological_process | cytoplasmic translation |
| H | 0003723 | molecular_function | RNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0006412 | biological_process | translation |
| H | 0019843 | molecular_function | rRNA binding |
| H | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| K | 0006364 | biological_process | rRNA processing |
| K | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| K | 0030686 | cellular_component | 90S preribosome |
| K | 0032040 | cellular_component | small-subunit processome |
| K | 0042274 | biological_process | ribosomal small subunit biogenesis |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0015935 | cellular_component | small ribosomal subunit |
| M | 0019843 | molecular_function | rRNA binding |
| M | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| M | 0042274 | biological_process | ribosomal small subunit biogenesis |
| M | 0043226 | cellular_component | organelle |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005730 | cellular_component | nucleolus |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| U | 0005829 | cellular_component | cytosol |
| Y | 0022626 | cellular_component | cytosolic ribosome |
| Y | 0042274 | biological_process | ribosomal small subunit biogenesis |
| Z | 0022627 | cellular_component | cytosolic small ribosomal subunit |
Functional Information from PROSITE/UniProt
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR |
| Chain | Residue | Details |
| Z | GLY100-ARG117 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPtPSD |
| Chain | Residue | Details |
| R | LEU115-ASP137 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
| Chain | Residue | Details |
| a | LYS62-ARG69 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDmVvVgQcRPLS |
| Chain | Residue | Details |
| O | GLY125-SER137 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdSkfrLilIesrihrLarY |
| Chain | Residue | Details |
| Q | VAL98-TYR128 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HqKRLSaPshWlLdK |
| Chain | Residue | Details |
| H | HIS8-LYS22 |
| site_id | PS00529 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKTtGFAlIYDSpealkkfE |
| Chain | Residue | Details |
| b | TYR67-GLU89 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. ITGGnDkqGfPM |
| Chain | Residue | Details |
| J | ILE52-MET63 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAivLIGDsd.GhVGlGiktsk.EVat.AI |
| Chain | Residue | Details |
| F | GLY101-ILE133 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtlVYKlglAkSihhARvLI |
| Chain | Residue | Details |
| M | LEU103-ILE127 |
| site_id | PS00712 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IsSKrLRNkIAGYtTH |
| Chain | Residue | Details |
| U | ILE41-HIS56 |
| site_id | PS00948 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. RLtRELEKKFSdRH |
| Chain | Residue | Details |
| K | ARG82-HIS95 |
| site_id | PS00963 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlIVVtDprtDaqaIkEasyvNIP |
| Chain | Residue | Details |
| D | PRO121-PRO145 |
| site_id | PS00996 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
| Chain | Residue | Details |
| Y | LEU11-ALA19 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRIfEvCLaDL |
| Chain | Residue | Details |
| E | LEU61-LEU73 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI13 |
| Number of Residues | 52 |
| Details | Domain: {"description":"KH","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
