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9VD1

Cryo-EM structure of Dimeric Suv3-ssRNA-AMPPNP complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000175molecular_function3'-5'-RNA exonuclease activity
A0000957biological_processmitochondrial RNA catabolic process
A0000958biological_processmitochondrial mRNA catabolic process
A0000962biological_processpositive regulation of mitochondrial RNA catabolic process
A0000965biological_processmitochondrial RNA 3'-end processing
A0003677molecular_functionDNA binding
A0003678molecular_functionDNA helicase activity
A0003723molecular_functionRNA binding
A0003724molecular_functionRNA helicase activity
A0003725molecular_functiondouble-stranded RNA binding
A0004386molecular_functionhelicase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0006310biological_processDNA recombination
A0006401biological_processRNA catabolic process
A0007005biological_processmitochondrion organization
A0016887molecular_functionATP hydrolysis activity
A0030307biological_processpositive regulation of cell growth
A0034458molecular_function3'-5' RNA helicase activity
A0035945biological_processmitochondrial ncRNA surveillance
A0035946biological_processmitochondrial mRNA surveillance
A0042645cellular_componentmitochondrial nucleoid
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0043066biological_processnegative regulation of apoptotic process
A0045025cellular_componentmitochondrial degradosome
A2000827biological_processmitochondrial RNA surveillance
B0000175molecular_function3'-5'-RNA exonuclease activity
B0000957biological_processmitochondrial RNA catabolic process
B0000958biological_processmitochondrial mRNA catabolic process
B0000962biological_processpositive regulation of mitochondrial RNA catabolic process
B0000965biological_processmitochondrial RNA 3'-end processing
B0003677molecular_functionDNA binding
B0003678molecular_functionDNA helicase activity
B0003723molecular_functionRNA binding
B0003724molecular_functionRNA helicase activity
B0003725molecular_functiondouble-stranded RNA binding
B0004386molecular_functionhelicase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005739cellular_componentmitochondrion
B0005759cellular_componentmitochondrial matrix
B0006310biological_processDNA recombination
B0006401biological_processRNA catabolic process
B0007005biological_processmitochondrion organization
B0016887molecular_functionATP hydrolysis activity
B0030307biological_processpositive regulation of cell growth
B0034458molecular_function3'-5' RNA helicase activity
B0035945biological_processmitochondrial ncRNA surveillance
B0035946biological_processmitochondrial mRNA surveillance
B0042645cellular_componentmitochondrial nucleoid
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0043066biological_processnegative regulation of apoptotic process
B0045025cellular_componentmitochondrial degradosome
B2000827biological_processmitochondrial RNA surveillance
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues280
DetailsDomain: {"description":"Helicase ATP-binding"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues330
DetailsDomain: {"description":"Helicase C-terminal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00542","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00499","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

256158

PDB entries from 2026-07-08

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