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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9V53

Structure of TolC, YbjP, and AcrABZ complex

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
BL0005515molecular_functionprotein binding
BL0005886cellular_componentplasma membrane
BL0009410biological_processresponse to xenobiotic stimulus
BL0009636biological_processresponse to toxic substance
BL0015125molecular_functionbile acid transmembrane transporter activity
BL0015567molecular_functionalkane transmembrane transporter activity
BL0015721biological_processbile acid and bile salt transport
BL0015895biological_processalkane transport
BL0015908biological_processfatty acid transport
BL0016020cellular_componentmembrane
BL0042802molecular_functionidentical protein binding
BL0042908biological_processxenobiotic transport
BL0042910molecular_functionxenobiotic transmembrane transporter activity
BL0042930biological_processenterobactin transport
BL0042931molecular_functionenterobactin transmembrane transporter activity
BL0046677biological_processresponse to antibiotic
BL0055085biological_processtransmembrane transport
BL0098567cellular_componentperiplasmic side of plasma membrane
BL0140330biological_processxenobiotic detoxification by transmembrane export across the cell outer membrane
BL1990281cellular_componentefflux pump complex
BO0005515molecular_functionprotein binding
BO0005886cellular_componentplasma membrane
BO0009410biological_processresponse to xenobiotic stimulus
BO0009636biological_processresponse to toxic substance
BO0015125molecular_functionbile acid transmembrane transporter activity
BO0015567molecular_functionalkane transmembrane transporter activity
BO0015721biological_processbile acid and bile salt transport
BO0015895biological_processalkane transport
BO0015908biological_processfatty acid transport
BO0016020cellular_componentmembrane
BO0042802molecular_functionidentical protein binding
BO0042908biological_processxenobiotic transport
BO0042910molecular_functionxenobiotic transmembrane transporter activity
BO0042930biological_processenterobactin transport
BO0042931molecular_functionenterobactin transmembrane transporter activity
BO0046677biological_processresponse to antibiotic
BO0055085biological_processtransmembrane transport
BO0098567cellular_componentperiplasmic side of plasma membrane
BO0140330biological_processxenobiotic detoxification by transmembrane export across the cell outer membrane
BO1990281cellular_componentefflux pump complex
BT0005515molecular_functionprotein binding
BT0005886cellular_componentplasma membrane
BT0009410biological_processresponse to xenobiotic stimulus
BT0009636biological_processresponse to toxic substance
BT0015125molecular_functionbile acid transmembrane transporter activity
BT0015567molecular_functionalkane transmembrane transporter activity
BT0015721biological_processbile acid and bile salt transport
BT0015895biological_processalkane transport
BT0015908biological_processfatty acid transport
BT0016020cellular_componentmembrane
BT0042802molecular_functionidentical protein binding
BT0042908biological_processxenobiotic transport
BT0042910molecular_functionxenobiotic transmembrane transporter activity
BT0042930biological_processenterobactin transport
BT0042931molecular_functionenterobactin transmembrane transporter activity
BT0046677biological_processresponse to antibiotic
BT0055085biological_processtransmembrane transport
BT0098567cellular_componentperiplasmic side of plasma membrane
BT0140330biological_processxenobiotic detoxification by transmembrane export across the cell outer membrane
BT1990281cellular_componentefflux pump complex
ZL0005515molecular_functionprotein binding
ZL0005886cellular_componentplasma membrane
ZL0009279cellular_componentcell outer membrane
ZL0042910molecular_functionxenobiotic transmembrane transporter activity
ZL0046677biological_processresponse to antibiotic
ZL1990961biological_processxenobiotic detoxification by transmembrane export across the plasma membrane
ZO0005515molecular_functionprotein binding
ZO0005886cellular_componentplasma membrane
ZO0009279cellular_componentcell outer membrane
ZO0042910molecular_functionxenobiotic transmembrane transporter activity
ZO0046677biological_processresponse to antibiotic
ZO1990961biological_processxenobiotic detoxification by transmembrane export across the plasma membrane
ZT0005515molecular_functionprotein binding
ZT0005886cellular_componentplasma membrane
ZT0009279cellular_componentcell outer membrane
ZT0042910molecular_functionxenobiotic transmembrane transporter activity
ZT0046677biological_processresponse to antibiotic
ZT1990961biological_processxenobiotic detoxification by transmembrane export across the plasma membrane
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues630
DetailsTopological domain: {"description":"Periplasmic"}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues33
DetailsTransmembrane: {"description":"Beta stranded; Name=S1"}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues81
DetailsTopological domain: {"description":"Extracellular"}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues39
DetailsTransmembrane: {"description":"Beta stranded; Name=S2"}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues30
DetailsTransmembrane: {"description":"Beta stranded; Name=S4"}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues30
DetailsTransmembrane: {"description":"Beta stranded; Name=S5"}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues621
DetailsRepeat: {"description":"1"}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues645
DetailsRepeat: {"description":"2"}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues84
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues45
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues3
DetailsLipidation: {"description":"S-diacylglycerol cysteine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00303","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues444
DetailsCoiled coil: {}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues372
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"15919996","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues54
DetailsTransmembrane: {"description":"Helical; Name=1"}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues1932
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"15919996","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues57
DetailsTransmembrane: {"description":"Helical; Name=2"}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues57
DetailsTransmembrane: {"description":"Helical; Name=3"}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues63
DetailsTransmembrane: {"description":"Helical; Name=4"}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues54
DetailsTransmembrane: {"description":"Helical; Name=5"}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues72
DetailsTransmembrane: {"description":"Helical; Name=6"}
ChainResidueDetails
site_idSWS_FT_FI21
Number of Residues48
DetailsTransmembrane: {"description":"Helical; Name=7"}
ChainResidueDetails
site_idSWS_FT_FI22
Number of Residues48
DetailsTransmembrane: {"description":"Helical; Name=8"}
ChainResidueDetails
site_idSWS_FT_FI23
Number of Residues57
DetailsTransmembrane: {"description":"Helical; Name=9"}
ChainResidueDetails
site_idSWS_FT_FI24
Number of Residues54
DetailsTransmembrane: {"description":"Helical; Name=10"}
ChainResidueDetails
site_idSWS_FT_FI25
Number of Residues57
DetailsTransmembrane: {"description":"Helical; Name=11"}
ChainResidueDetails
site_idSWS_FT_FI26
Number of Residues57
DetailsTransmembrane: {"description":"Helical; Name=12"}
ChainResidueDetails
site_idSWS_FT_FI27
Number of Residues18
DetailsTopological domain: {"description":"Periplasmic","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails
site_idSWS_FT_FI28
Number of Residues60
DetailsTransmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_01484","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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