9V1I

Cryo- EM structure of ribosomal large subunit (LSU) from Entamoeba histolytica at 2.8 angstrom resolution

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
lD	0002181	biological_process	cytoplasmic translation
lD	0003723	molecular_function	RNA binding
lD	0003735	molecular_function	structural constituent of ribosome
lD	0005737	cellular_component	cytoplasm
lD	0005840	cellular_component	ribosome
lD	0022625	cellular_component	cytosolic large ribosomal subunit
lD	1990904	cellular_component	ribonucleoprotein complex
lE	0003723	molecular_function	RNA binding
lE	0003735	molecular_function	structural constituent of ribosome
lE	0005840	cellular_component	ribosome
lE	0006412	biological_process	translation
lE	0022625	cellular_component	cytosolic large ribosomal subunit
lE	1990904	cellular_component	ribonucleoprotein complex
lF	0003723	molecular_function	RNA binding
lF	0003735	molecular_function	structural constituent of ribosome
lF	0005840	cellular_component	ribosome
lF	0022625	cellular_component	cytosolic large ribosomal subunit
lF	1990904	cellular_component	ribonucleoprotein complex
lG	0000027	biological_process	ribosomal large subunit assembly
lG	0003735	molecular_function	structural constituent of ribosome
lG	0005737	cellular_component	cytoplasm
lG	0005840	cellular_component	ribosome
lG	0008097	molecular_function	5S rRNA binding
lG	0022625	cellular_component	cytosolic large ribosomal subunit
lG	0022626	cellular_component	cytosolic ribosome
lG	1990904	cellular_component	ribonucleoprotein complex
lH	0002181	biological_process	cytoplasmic translation
lH	0003723	molecular_function	RNA binding
lH	0003735	molecular_function	structural constituent of ribosome
lH	0005840	cellular_component	ribosome
lH	0022625	cellular_component	cytosolic large ribosomal subunit
lH	1990904	cellular_component	ribonucleoprotein complex
lI	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
lI	0003723	molecular_function	RNA binding
lI	0003735	molecular_function	structural constituent of ribosome
lI	0005840	cellular_component	ribosome
lI	0022625	cellular_component	cytosolic large ribosomal subunit
lI	1990904	cellular_component	ribonucleoprotein complex
lJ	0000470	biological_process	maturation of LSU-rRNA
lJ	0003723	molecular_function	RNA binding
lJ	0005840	cellular_component	ribosome
lJ	0022625	cellular_component	cytosolic large ribosomal subunit
lJ	1990904	cellular_component	ribonucleoprotein complex
lK	0002181	biological_process	cytoplasmic translation
lK	0003735	molecular_function	structural constituent of ribosome
lK	0005840	cellular_component	ribosome
lK	0022625	cellular_component	cytosolic large ribosomal subunit
lK	1990904	cellular_component	ribonucleoprotein complex
lL	0003735	molecular_function	structural constituent of ribosome
lL	0005840	cellular_component	ribosome
lL	0006412	biological_process	translation
lL	0022625	cellular_component	cytosolic large ribosomal subunit
lL	1990904	cellular_component	ribonucleoprotein complex
lM	0003723	molecular_function	RNA binding
lM	0003735	molecular_function	structural constituent of ribosome
lM	0005634	cellular_component	nucleus
lM	0005737	cellular_component	cytoplasm
lM	0005840	cellular_component	ribosome
lM	0006412	biological_process	translation
lM	0019843	molecular_function	rRNA binding
lM	0022625	cellular_component	cytosolic large ribosomal subunit
lM	1990904	cellular_component	ribonucleoprotein complex
lN	0003723	molecular_function	RNA binding
lN	0003735	molecular_function	structural constituent of ribosome
lN	0005840	cellular_component	ribosome
lN	0022625	cellular_component	cytosolic large ribosomal subunit
lN	1990904	cellular_component	ribonucleoprotein complex
lO	0003729	molecular_function	mRNA binding
lO	0003735	molecular_function	structural constituent of ribosome
lO	0005840	cellular_component	ribosome
lO	0017148	biological_process	negative regulation of translation
lO	0022625	cellular_component	cytosolic large ribosomal subunit
lO	1990904	cellular_component	ribonucleoprotein complex
lP	0003723	molecular_function	RNA binding
lP	0003735	molecular_function	structural constituent of ribosome
lP	0005840	cellular_component	ribosome
lP	0022625	cellular_component	cytosolic large ribosomal subunit
lP	0042273	biological_process	ribosomal large subunit biogenesis
lP	1990904	cellular_component	ribonucleoprotein complex
lQ	0002181	biological_process	cytoplasmic translation
lQ	0003723	molecular_function	RNA binding
lQ	0003735	molecular_function	structural constituent of ribosome
lQ	0005840	cellular_component	ribosome
lQ	0022625	cellular_component	cytosolic large ribosomal subunit
lQ	1990904	cellular_component	ribonucleoprotein complex
lR	0002181	biological_process	cytoplasmic translation
lR	0003735	molecular_function	structural constituent of ribosome
lR	0005840	cellular_component	ribosome
lR	0022625	cellular_component	cytosolic large ribosomal subunit
lR	1990904	cellular_component	ribonucleoprotein complex
lS	0003723	molecular_function	RNA binding
lS	0003735	molecular_function	structural constituent of ribosome
lS	0005840	cellular_component	ribosome
lS	0022625	cellular_component	cytosolic large ribosomal subunit
lS	1990904	cellular_component	ribonucleoprotein complex
lT	0002181	biological_process	cytoplasmic translation
lT	0003735	molecular_function	structural constituent of ribosome
lT	0005840	cellular_component	ribosome
lT	0022625	cellular_component	cytosolic large ribosomal subunit
lT	1990904	cellular_component	ribonucleoprotein complex
lU	0003723	molecular_function	RNA binding
lU	0003735	molecular_function	structural constituent of ribosome
lU	0005840	cellular_component	ribosome
lU	0022625	cellular_component	cytosolic large ribosomal subunit
lU	1990904	cellular_component	ribonucleoprotein complex
lV	0003735	molecular_function	structural constituent of ribosome
lV	0005840	cellular_component	ribosome
lV	0022625	cellular_component	cytosolic large ribosomal subunit
lV	1990904	cellular_component	ribonucleoprotein complex
lW	0002181	biological_process	cytoplasmic translation
lW	0003723	molecular_function	RNA binding
lW	0003735	molecular_function	structural constituent of ribosome
lW	0005840	cellular_component	ribosome
lW	1990904	cellular_component	ribonucleoprotein complex
lX	0003735	molecular_function	structural constituent of ribosome
lX	0005840	cellular_component	ribosome
lX	0022625	cellular_component	cytosolic large ribosomal subunit
lX	0070180	molecular_function	large ribosomal subunit rRNA binding
lX	1990904	cellular_component	ribonucleoprotein complex
lY	0003723	molecular_function	RNA binding
lY	0003735	molecular_function	structural constituent of ribosome
lY	0005840	cellular_component	ribosome
lY	0019843	molecular_function	rRNA binding
lY	0022625	cellular_component	cytosolic large ribosomal subunit
lY	1990904	cellular_component	ribonucleoprotein complex
lZ	0002181	biological_process	cytoplasmic translation
lZ	0003729	molecular_function	mRNA binding
lZ	0003735	molecular_function	structural constituent of ribosome
lZ	0005840	cellular_component	ribosome
lZ	0022625	cellular_component	cytosolic large ribosomal subunit
lZ	1990904	cellular_component	ribonucleoprotein complex
la	0002181	biological_process	cytoplasmic translation
la	0003723	molecular_function	RNA binding
la	0003735	molecular_function	structural constituent of ribosome
la	0005840	cellular_component	ribosome
la	0022625	cellular_component	cytosolic large ribosomal subunit
la	0042273	biological_process	ribosomal large subunit biogenesis
la	1990904	cellular_component	ribonucleoprotein complex
lb	0003735	molecular_function	structural constituent of ribosome
lb	0005840	cellular_component	ribosome
lb	0022625	cellular_component	cytosolic large ribosomal subunit
lb	1990904	cellular_component	ribonucleoprotein complex
lc	0003735	molecular_function	structural constituent of ribosome
lc	0005737	cellular_component	cytoplasm
lc	0005783	cellular_component	endoplasmic reticulum
lc	0005829	cellular_component	cytosol
lc	0005840	cellular_component	ribosome
lc	0022625	cellular_component	cytosolic large ribosomal subunit
lc	1990904	cellular_component	ribonucleoprotein complex
ld	0002181	biological_process	cytoplasmic translation
ld	0003735	molecular_function	structural constituent of ribosome
ld	0005840	cellular_component	ribosome
ld	0022625	cellular_component	cytosolic large ribosomal subunit
ld	1990904	cellular_component	ribonucleoprotein complex
le	0003723	molecular_function	RNA binding
le	0003735	molecular_function	structural constituent of ribosome
le	0005840	cellular_component	ribosome
le	0022625	cellular_component	cytosolic large ribosomal subunit
le	1990904	cellular_component	ribonucleoprotein complex
lf	0002181	biological_process	cytoplasmic translation
lf	0003735	molecular_function	structural constituent of ribosome
lf	0005840	cellular_component	ribosome
lf	0022625	cellular_component	cytosolic large ribosomal subunit
lf	1990904	cellular_component	ribonucleoprotein complex
lg	0005840	cellular_component	ribosome
lg	0022625	cellular_component	cytosolic large ribosomal subunit
lg	1990904	cellular_component	ribonucleoprotein complex
lh	0003735	molecular_function	structural constituent of ribosome
lh	0005840	cellular_component	ribosome
lh	0022625	cellular_component	cytosolic large ribosomal subunit
lh	0042254	biological_process	ribosome biogenesis
lh	1990904	cellular_component	ribonucleoprotein complex
lj	0002181	biological_process	cytoplasmic translation
lj	0003735	molecular_function	structural constituent of ribosome
lj	0005840	cellular_component	ribosome
lj	0042273	biological_process	ribosomal large subunit biogenesis
lj	1990904	cellular_component	ribonucleoprotein complex
lk	0002181	biological_process	cytoplasmic translation
lk	0003735	molecular_function	structural constituent of ribosome
lk	0005840	cellular_component	ribosome
lk	0022625	cellular_component	cytosolic large ribosomal subunit
lk	1990904	cellular_component	ribonucleoprotein complex
ll	0003723	molecular_function	RNA binding
ll	0005840	cellular_component	ribosome
ll	0008270	molecular_function	zinc ion binding
ll	0019843	molecular_function	rRNA binding
ll	0022625	cellular_component	cytosolic large ribosomal subunit
ll	0046872	molecular_function	metal ion binding
ll	1990904	cellular_component	ribonucleoprotein complex
lm	0005840	cellular_component	ribosome
lm	1990904	cellular_component	ribonucleoprotein complex
ln	0003735	molecular_function	structural constituent of ribosome
ln	0005840	cellular_component	ribosome
ln	0022618	biological_process	protein-RNA complex assembly
ln	0022625	cellular_component	cytosolic large ribosomal subunit
ln	1990904	cellular_component	ribonucleoprotein complex
lo	0002181	biological_process	cytoplasmic translation
lo	0003735	molecular_function	structural constituent of ribosome
lo	0005840	cellular_component	ribosome
lo	0022625	cellular_component	cytosolic large ribosomal subunit
lo	1990904	cellular_component	ribonucleoprotein complex
lp	0005737	cellular_component	cytoplasm
lp	0005840	cellular_component	ribosome
lp	1990904	cellular_component	ribonucleoprotein complex
lq	0002181	biological_process	cytoplasmic translation
lq	0003735	molecular_function	structural constituent of ribosome
lq	0005840	cellular_component	ribosome
lq	0022625	cellular_component	cytosolic large ribosomal subunit
lq	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIIrqrrtwrrk.DGvtlyFedNaaVI

Chain	Residue	Details
lX	ALA79-ILE105

---

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAFVRLApdveameV

Chain	Residue	Details
lY	LYS99-VAL114

---

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LetLTGQtpVlSeARyT

Chain	Residue	Details
lM	LEU37-THR53

---

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrLyRAhGSinsfssspCHIELiL

Chain	Residue	Details
lR	ARG126-LEU150

---

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNPvD

Chain	Residue	Details
lD	PRO197-ASP208

---

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FgtdeciDvcSvTkGHGynGvikR

Chain	Residue	Details
lE	PHE211-ARG234

---

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGfLpkqp.ViVraryFSekAqqkIkavG

Chain	Residue	Details
lc	LYS111-GLY142

---

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvlkCGnrkVWLDP

Chain	Residue	Details
lU	GLN7-PRO26

---

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. ILklLrLrQinNaVfikanastikMLrlVdpYV

Chain	Residue	Details
lI	ILE90-VAL122

---

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyvlGtKatLKtiRdGksKlVII

Chain	Residue	Details
le	SER24-ILE48

---

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. PkqmRrfAVaSCIaASAvpalvsaRGH

Chain	Residue	Details
lF	PRO116-HIS142

---

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. DLGTacGRyfsvsvLsIiDgG

Chain	Residue	Details
le	ASP80-GLY100

---

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkklqVPYciVkGKarLG

Chain	Residue	Details
lJ	CYS167-GLY184

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site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDyVtilcnssiqh.GlpYkaFhGkTG

Chain	Residue	Details
lV	GLY37-GLY62

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site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLKieC

Chain	Residue	Details
lq	LYS61-CYS72

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