| Chain | GOid | namespace | contents |
| M | 0000045 | biological_process | autophagosome assembly |
| M | 0005515 | molecular_function | protein binding |
| M | 0005769 | cellular_component | early endosome |
| M | 0005794 | cellular_component | Golgi apparatus |
| M | 0005802 | cellular_component | trans-Golgi network |
| M | 0005829 | cellular_component | cytosol |
| M | 0006605 | biological_process | protein targeting |
| M | 0006622 | biological_process | protein targeting to lysosome |
| M | 0006886 | biological_process | intracellular protein transport |
| M | 0006892 | biological_process | post-Golgi vesicle-mediated transport |
| M | 0006895 | biological_process | Golgi to endosome transport |
| M | 0008104 | biological_process | intracellular protein localization |
| M | 0008320 | molecular_function | transmembrane protein transporter activity |
| M | 0016192 | biological_process | vesicle-mediated transport |
| M | 0019904 | molecular_function | protein domain specific binding |
| M | 0030124 | cellular_component | AP-4 adaptor complex |
| M | 0031904 | cellular_component | endosome lumen |
| M | 0032588 | cellular_component | trans-Golgi network membrane |
| M | 0035615 | molecular_function | clathrin-cargo adaptor activity |
| M | 0070062 | cellular_component | extracellular exosome |
| M | 0071806 | biological_process | protein transmembrane transport |
| M | 0090160 | biological_process | Golgi to lysosome transport |
| M | 1903361 | biological_process | protein localization to basolateral plasma membrane |
| R | 0000139 | cellular_component | Golgi membrane |
| R | 0000287 | molecular_function | magnesium ion binding |
| R | 0002090 | biological_process | regulation of receptor internalization |
| R | 0003723 | molecular_function | RNA binding |
| R | 0003924 | molecular_function | GTPase activity |
| R | 0003925 | molecular_function | G protein activity |
| R | 0005515 | molecular_function | protein binding |
| R | 0005525 | molecular_function | GTP binding |
| R | 0005737 | cellular_component | cytoplasm |
| R | 0005765 | cellular_component | lysosomal membrane |
| R | 0005829 | cellular_component | cytosol |
| R | 0005886 | cellular_component | plasma membrane |
| R | 0005925 | cellular_component | focal adhesion |
| R | 0006878 | biological_process | intracellular copper ion homeostasis |
| R | 0006886 | biological_process | intracellular protein transport |
| R | 0006890 | biological_process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
| R | 0014069 | cellular_component | postsynaptic density |
| R | 0016192 | biological_process | vesicle-mediated transport |
| R | 0019904 | molecular_function | protein domain specific binding |
| R | 0031252 | cellular_component | cell leading edge |
| R | 0032991 | cellular_component | protein-containing complex |
| R | 0034315 | biological_process | regulation of Arp2/3 complex-mediated actin nucleation |
| R | 0035964 | biological_process | COPI-coated vesicle budding |
| R | 0045202 | cellular_component | synapse |
| R | 0046836 | biological_process | glycolipid transport |
| R | 0060292 | biological_process | long-term synaptic depression |
| R | 0070062 | cellular_component | extracellular exosome |
| R | 0097061 | biological_process | dendritic spine organization |
| R | 0098586 | biological_process | cellular response to virus |
| R | 0160281 | cellular_component | cytoplasmic side of trans-Golgi network membrane |
| R | 1903292 | biological_process | protein localization to Golgi membrane |
| R | 1990386 | biological_process | mitotic cleavage furrow ingression |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005794 | cellular_component | Golgi apparatus |
| S | 0005802 | cellular_component | trans-Golgi network |
| S | 0006605 | biological_process | protein targeting |
| S | 0008104 | biological_process | intracellular protein localization |
| S | 0012505 | cellular_component | endomembrane system |
| S | 0016192 | biological_process | vesicle-mediated transport |
| S | 0030124 | cellular_component | AP-4 adaptor complex |
| S | 0031904 | cellular_component | endosome lumen |
| S | 0032588 | cellular_component | trans-Golgi network membrane |