Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

9T8N

E. coli 70S ribosome from delta-10 strain, PTC class 3

Functional Information from GO Data

Chain	GOid	namespace	contents
c	0000027	biological_process	ribosomal large subunit assembly
c	0002181	biological_process	cytoplasmic translation
c	0003735	molecular_function	structural constituent of ribosome
c	0005515	molecular_function	protein binding
c	0005737	cellular_component	cytoplasm
c	0005829	cellular_component	cytosol
c	0006412	biological_process	translation
c	0008270	molecular_function	zinc ion binding
c	0015934	cellular_component	large ribosomal subunit
c	0019843	molecular_function	rRNA binding
c	0022625	cellular_component	cytosolic large ribosomal subunit
c	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
c	1990082	cellular_component	DnaA-L2 complex
d	0000027	biological_process	ribosomal large subunit assembly
d	0002181	biological_process	cytoplasmic translation
d	0003735	molecular_function	structural constituent of ribosome
d	0005515	molecular_function	protein binding
d	0005737	cellular_component	cytoplasm
d	0005829	cellular_component	cytosol
d	0006412	biological_process	translation
d	0019843	molecular_function	rRNA binding
d	0022625	cellular_component	cytosolic large ribosomal subunit
e	0001070	molecular_function	RNA-binding transcription regulator activity
e	0002181	biological_process	cytoplasmic translation
e	0003677	molecular_function	DNA binding
e	0003735	molecular_function	structural constituent of ribosome
e	0005515	molecular_function	protein binding
e	0005737	cellular_component	cytoplasm
e	0005829	cellular_component	cytosol
e	0006412	biological_process	translation
e	0006417	biological_process	regulation of translation
e	0015934	cellular_component	large ribosomal subunit
e	0017148	biological_process	negative regulation of translation
e	0019843	molecular_function	rRNA binding
e	0022625	cellular_component	cytosolic large ribosomal subunit
e	0030371	molecular_function	translation repressor activity
e	0031555	biological_process	transcriptional attenuation
e	0042255	biological_process	ribosome assembly
e	0045892	biological_process	negative regulation of DNA-templated transcription
e	0048027	molecular_function	mRNA 5'-UTR binding
e	0060698	molecular_function	endoribonuclease inhibitor activity
e	2000766	biological_process	negative regulation of cytoplasmic translation
k	0002181	biological_process	cytoplasmic translation
k	0003735	molecular_function	structural constituent of ribosome
k	0005515	molecular_function	protein binding
k	0005737	cellular_component	cytoplasm
k	0006412	biological_process	translation
k	0019843	molecular_function	rRNA binding
k	0022625	cellular_component	cytosolic large ribosomal subunit
l	0003735	molecular_function	structural constituent of ribosome
l	0006412	biological_process	translation
l	0019843	molecular_function	rRNA binding
l	0022625	cellular_component	cytosolic large ribosomal subunit
q	0002181	biological_process	cytoplasmic translation
q	0003735	molecular_function	structural constituent of ribosome
q	0005737	cellular_component	cytoplasm
q	0005829	cellular_component	cytosol
q	0006412	biological_process	translation
q	0019843	molecular_function	rRNA binding
q	0022625	cellular_component	cytosolic large ribosomal subunit
r	0002181	biological_process	cytoplasmic translation
r	0003735	molecular_function	structural constituent of ribosome
r	0005515	molecular_function	protein binding
r	0005737	cellular_component	cytoplasm
r	0005829	cellular_component	cytosol
r	0006412	biological_process	translation
r	0015934	cellular_component	large ribosomal subunit
r	0019843	molecular_function	rRNA binding
r	0022625	cellular_component	cytosolic large ribosomal subunit
r	0042255	biological_process	ribosome assembly
r	0042256	biological_process	cytosolic ribosome assembly
r	0070180	molecular_function	large ribosomal subunit rRNA binding
r	1902626	biological_process	assembly of large subunit precursor of preribosome
v	0000027	biological_process	ribosomal large subunit assembly
v	0001558	biological_process	regulation of cell growth
v	0002181	biological_process	cytoplasmic translation
v	0003735	molecular_function	structural constituent of ribosome
v	0005515	molecular_function	protein binding
v	0005737	cellular_component	cytoplasm
v	0006412	biological_process	translation
v	0022625	cellular_component	cytosolic large ribosomal subunit
v	0042256	biological_process	cytosolic ribosome assembly
v	0043022	molecular_function	ribosome binding
v	0090070	biological_process	positive regulation of ribosome biogenesis
v	1902626	biological_process	assembly of large subunit precursor of preribosome
z	0000027	biological_process	ribosomal large subunit assembly
z	0000302	biological_process	response to reactive oxygen species
z	0002181	biological_process	cytoplasmic translation
z	0003735	molecular_function	structural constituent of ribosome
z	0005515	molecular_function	protein binding
z	0005737	cellular_component	cytoplasm
z	0005829	cellular_component	cytosol
z	0006412	biological_process	translation
z	0009314	biological_process	response to radiation
z	0022625	cellular_component	cytosolic large ribosomal subunit

Functional Information from PROSITE/UniProt

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. KriMpRAkGRadrilkrtSHITVvV

Chain	Residue	Details
r	LYS83-VAL107

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGTAmNPvD

Chain	Residue	Details
c	PRO218-ASP229

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FadvkkvDvtGtSkGKGfaGtvkR

Chain	Residue	Details
d	PHE101-ARG124

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVILaGeVttp..VtVrglrVTkgAraaIeaaG

Chain	Residue	Details
k	LYS109-GLY139

site_id	PS00586
Number of Residues	12
Details	RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRqGKIWIRVFP

Chain	Residue	Details
l	LYS58-PRO69

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GsIIvRQRGtkfhaG

Chain	Residue	Details
v	GLY34-GLY48

site_id	PS01169
Number of Residues	23
Details	RIBOSOMAL_L21 Ribosomal protein L21 signature. VkivKfrrRKhyrkqqGHRQwfT

Chain	Residue	Details
q	VAL72-THR94

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"HAMAP-Rule","id":"MF_01320","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18723842","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	1
Details	Modified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"365579","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"331083","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"34403461","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"34504068","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"7O19","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"7O1A","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"7O1C","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"7OIZ","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"7OJ0","evidenceCode":"ECO:0000312"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)