| Chain | GOid | namespace | contents |
| A | 0000045 | biological_process | autophagosome assembly |
| A | 0000407 | cellular_component | phagophore assembly site |
| A | 0000422 | biological_process | autophagy of mitochondrion |
| A | 0000425 | biological_process | pexophagy |
| A | 0005515 | molecular_function | protein binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005789 | cellular_component | endoplasmic reticulum membrane |
| A | 0005829 | cellular_component | cytosol |
| A | 0006914 | biological_process | autophagy |
| A | 0015914 | biological_process | phospholipid transport |
| A | 0016236 | biological_process | macroautophagy |
| A | 0016237 | biological_process | microautophagy |
| A | 0032258 | biological_process | cytoplasm to vacuole targeting by the Cvt pathway |
| A | 0032266 | molecular_function | phosphatidylinositol-3-phosphate binding |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0034045 | cellular_component | phagophore assembly site membrane |
| A | 0034727 | biological_process | piecemeal microautophagy of the nucleus |
| A | 0043495 | molecular_function | protein-membrane adaptor activity |
| A | 0044232 | cellular_component | organelle membrane contact site |
| A | 0044804 | biological_process | nucleophagy |
| A | 0061709 | biological_process | reticulophagy |
| A | 0061723 | biological_process | glycophagy |
| A | 0061908 | cellular_component | phagophore |
| A | 0062079 | cellular_component | ATG2-ATG18 complex |
| A | 0070971 | cellular_component | endoplasmic reticulum exit site |
| A | 0097632 | cellular_component | extrinsic component of phagophore assembly site membrane |
| A | 0120009 | biological_process | intermembrane lipid transfer |
| A | 0120013 | molecular_function | lipid transfer activity |
| A | 0120014 | molecular_function | phospholipid transfer activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005774 | cellular_component | vacuolar membrane |
| B | 0010008 | cellular_component | endosome membrane |
| B | 0034045 | cellular_component | phagophore assembly site membrane |