9SW6
Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015948 | biological_process | methanogenesis |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0051912 | molecular_function | CoB--CoM heterodisulfide reductase activity |
| B | 0015948 | biological_process | methanogenesis |
| B | 0016020 | cellular_component | membrane |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0051912 | molecular_function | CoB--CoM heterodisulfide reductase activity |
| C | 0005886 | cellular_component | plasma membrane |
| C | 0015948 | biological_process | methanogenesis |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0051912 | molecular_function | CoB--CoM heterodisulfide reductase activity |
| G | 0016491 | molecular_function | oxidoreductase activity |
| h | 0016491 | molecular_function | oxidoreductase activity |
| H | 0016491 | molecular_function | oxidoreductase activity |
| i | 0016787 | molecular_function | hydrolase activity |
| I | 0016787 | molecular_function | hydrolase activity |
| j | 0003954 | molecular_function | NADH dehydrogenase activity |
| j | 0016020 | cellular_component | membrane |
| j | 0018493 | molecular_function | formylmethanofuran dehydrogenase activity |
| j | 0019386 | biological_process | methanogenesis, from carbon dioxide |
| j | 0022904 | biological_process | respiratory electron transport chain |
| J | 0003954 | molecular_function | NADH dehydrogenase activity |
| J | 0016020 | cellular_component | membrane |
| J | 0018493 | molecular_function | formylmethanofuran dehydrogenase activity |
| J | 0019386 | biological_process | methanogenesis, from carbon dioxide |
| J | 0022904 | biological_process | respiratory electron transport chain |
| k | 0018493 | molecular_function | formylmethanofuran dehydrogenase activity |
| k | 0019386 | biological_process | methanogenesis, from carbon dioxide |
| K | 0018493 | molecular_function | formylmethanofuran dehydrogenase activity |
| K | 0019386 | biological_process | methanogenesis, from carbon dioxide |
| l | 0016491 | molecular_function | oxidoreductase activity |
| L | 0016491 | molecular_function | oxidoreductase activity |
Functional Information from PROSITE/UniProt
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiRCGaCQgTCP |
| Chain | Residue | Details |
| G | CYS9-PRO20 | |
| G | CYS394-PRO405 | |
| L | CYS12-PRO23 | |
| L | CYS61-PRO72 | |
| C | CYS35-PRO46 | |
| C | CYS79-PRO90 | |
| H | CYS31-PRO42 | |
| H | CYS71-PRO82 | |
| H | CYS115-PRO126 | |
| H | CYS154-PRO165 | |
| H | CYS194-PRO205 | |
| G | CYS76-PRO87 | |
| H | CYS239-PRO250 | |
| H | CYS271-PRO282 | |
| H | CYS308-PRO319 | |
| A | CYS254-PRO265 | |
| A | CYS301-GLU312 | |
| A | CYS591-PRO602 | |
| A | CYS620-PRO631 | |
| G | CYS107-PRO118 | |
| G | CYS146-PRO157 | |
| G | CYS177-PRO188 | |
| G | CYS216-PRO227 | |
| G | CYS246-PRO257 | |
| G | CYS325-PRO336 | |
| G | CYS366-PRO377 |
| site_id | PS00507 |
| Number of Residues | 26 |
| Details | NI_HGENASE_L_1 Nickel-dependent hydrogenases large subunit signature 1. RGFEkflqgrpieeaprivPRiCGIC |
| Chain | Residue | Details |
| F | ARG39-CYS64 |
| site_id | PS00508 |
| Number of Residues | 10 |
| Details | NI_HGENASE_L_2 Nickel-dependent hydrogenases large subunit signature 2. YDPCLSCat.H |
| Chain | Residue | Details |
| F | TYR439-HIS448 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 88 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 87 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 58 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 59 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 67 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 24 |
| Details | Repeat: {"description":"7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 266 |
| Details | Region: {"description":"7 X 13 AA repeats of [GW]-X-X-M-X-X-G-X-I-X-[IV]-X-G"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 28 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 6","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 7","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 28 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 8","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 9","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 11","evidences":[{"source":"PROSITE-ProRule","id":"PRU00711","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
