9SRD
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A3 | 0001682 | biological_process | tRNA 5'-leader removal |
| A3 | 0004526 | molecular_function | ribonuclease P activity |
| A3 | 0005737 | cellular_component | cytoplasm |
| A3 | 0006412 | biological_process | translation |
| AA | 0006412 | biological_process | translation |
| AB | 0006412 | biological_process | translation |
| AD | 0003735 | molecular_function | structural constituent of ribosome |
| AD | 0006412 | biological_process | translation |
| AD | 0015935 | cellular_component | small ribosomal subunit |
| AD | 0019843 | molecular_function | rRNA binding |
| AD | 0042274 | biological_process | ribosomal small subunit biogenesis |
| AD | 0043226 | cellular_component | organelle |
| AE | 0003723 | molecular_function | RNA binding |
| AE | 0003735 | molecular_function | structural constituent of ribosome |
| AE | 0006412 | biological_process | translation |
| AE | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AF | 0003735 | molecular_function | structural constituent of ribosome |
| AF | 0006412 | biological_process | translation |
| AF | 0019843 | molecular_function | rRNA binding |
| AF | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AG | 0006412 | biological_process | translation |
| AH | 0006412 | biological_process | translation |
| AH | 0019843 | molecular_function | rRNA binding |
| AI | 0006412 | biological_process | translation |
| AI | 0019843 | molecular_function | rRNA binding |
| AJ | 0006412 | biological_process | translation |
| AK | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| AK | 0003723 | molecular_function | RNA binding |
| AK | 0003735 | molecular_function | structural constituent of ribosome |
| AK | 0006412 | biological_process | translation |
| AK | 0015935 | cellular_component | small ribosomal subunit |
| AK | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AL | 0000049 | molecular_function | tRNA binding |
| AL | 0006412 | biological_process | translation |
| AM | 0006412 | biological_process | translation |
| AM | 0019843 | molecular_function | rRNA binding |
| AN | 0006412 | biological_process | translation |
| AN | 0019843 | molecular_function | rRNA binding |
| AO | 0005829 | cellular_component | cytosol |
| AO | 0006412 | biological_process | translation |
| AO | 0015935 | cellular_component | small ribosomal subunit |
| AO | 0019843 | molecular_function | rRNA binding |
| AP | 0002181 | biological_process | cytoplasmic translation |
| AP | 0003735 | molecular_function | structural constituent of ribosome |
| AP | 0006412 | biological_process | translation |
| AP | 0008270 | molecular_function | zinc ion binding |
| AP | 0019843 | molecular_function | rRNA binding |
| AP | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AQ | 0003735 | molecular_function | structural constituent of ribosome |
| AQ | 0006412 | biological_process | translation |
| AQ | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AQ | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| AR | 0003735 | molecular_function | structural constituent of ribosome |
| AR | 0006412 | biological_process | translation |
| AR | 0019843 | molecular_function | rRNA binding |
| AR | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AS | 0005829 | cellular_component | cytosol |
| AS | 0006412 | biological_process | translation |
| AT | 0000028 | biological_process | ribosomal small subunit assembly |
| AT | 0003735 | molecular_function | structural constituent of ribosome |
| AT | 0006412 | biological_process | translation |
| AT | 0019843 | molecular_function | rRNA binding |
| AT | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AU | 0000028 | biological_process | ribosomal small subunit assembly |
| AU | 0003723 | molecular_function | RNA binding |
| AU | 0003735 | molecular_function | structural constituent of ribosome |
| AU | 0006412 | biological_process | translation |
| AU | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AV | 0006412 | biological_process | translation |
| AW | 0006412 | biological_process | translation |
| AW | 0008270 | molecular_function | zinc ion binding |
| AX | 0000028 | biological_process | ribosomal small subunit assembly |
| AX | 0003735 | molecular_function | structural constituent of ribosome |
| AX | 0006412 | biological_process | translation |
| AX | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| AX | 0030490 | biological_process | maturation of SSU-rRNA |
| AY | 0006412 | biological_process | translation |
| AY | 0008270 | molecular_function | zinc ion binding |
| AZ | 0003735 | molecular_function | structural constituent of ribosome |
| AZ | 0006412 | biological_process | translation |
| AZ | 0019843 | molecular_function | rRNA binding |
| AZ | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| B4 | 0001682 | biological_process | tRNA 5'-leader removal |
| B4 | 0004526 | molecular_function | ribonuclease P activity |
| B4 | 0005737 | cellular_component | cytoplasm |
| B4 | 0006412 | biological_process | translation |
| B5 | 0003723 | molecular_function | RNA binding |
| B5 | 0003735 | molecular_function | structural constituent of ribosome |
| B5 | 0006412 | biological_process | translation |
| B5 | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| B5 | 0042273 | biological_process | ribosomal large subunit biogenesis |
| B6 | 0006412 | biological_process | translation |
| Ba | 0002181 | biological_process | cytoplasmic translation |
| Ba | 0003735 | molecular_function | structural constituent of ribosome |
| Ba | 0006412 | biological_process | translation |
| Ba | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| Bb | 0006412 | biological_process | translation |
| Bb | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BB | 0002181 | biological_process | cytoplasmic translation |
| BB | 0003723 | molecular_function | RNA binding |
| BB | 0003735 | molecular_function | structural constituent of ribosome |
| BB | 0006412 | biological_process | translation |
| BB | 0019843 | molecular_function | rRNA binding |
| BB | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| Bc | 0006412 | biological_process | translation |
| BC | 0003723 | molecular_function | RNA binding |
| BC | 0003735 | molecular_function | structural constituent of ribosome |
| BC | 0006412 | biological_process | translation |
| BC | 0019843 | molecular_function | rRNA binding |
| BC | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| Bd | 0006412 | biological_process | translation |
| BD | 0006412 | biological_process | translation |
| BD | 0019843 | molecular_function | rRNA binding |
| Be | 0003723 | molecular_function | RNA binding |
| Be | 0006412 | biological_process | translation |
| Be | 0008270 | molecular_function | zinc ion binding |
| Be | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BE | 0000049 | molecular_function | tRNA binding |
| BE | 0006412 | biological_process | translation |
| BE | 0019843 | molecular_function | rRNA binding |
| Bf | 0006412 | biological_process | translation |
| Bf | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BF | 0002181 | biological_process | cytoplasmic translation |
| BF | 0003735 | molecular_function | structural constituent of ribosome |
| BF | 0006412 | biological_process | translation |
| BF | 0019843 | molecular_function | rRNA binding |
| BF | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| Bg | 0006412 | biological_process | translation |
| Bg | 0008270 | molecular_function | zinc ion binding |
| Bg | 0019843 | molecular_function | rRNA binding |
| BG | 0001682 | biological_process | tRNA 5'-leader removal |
| BG | 0004526 | molecular_function | ribonuclease P activity |
| BG | 0005737 | cellular_component | cytoplasm |
| BG | 0006412 | biological_process | translation |
| Bi | 0005737 | cellular_component | cytoplasm |
| Bi | 0006412 | biological_process | translation |
| Bi | 0008270 | molecular_function | zinc ion binding |
| Bi | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| BI | 0003729 | molecular_function | mRNA binding |
| BI | 0003735 | molecular_function | structural constituent of ribosome |
| BI | 0005840 | cellular_component | ribosome |
| BI | 0006412 | biological_process | translation |
| BI | 0017148 | biological_process | negative regulation of translation |
| BI | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| Bj | 0006412 | biological_process | translation |
| Bj | 0008270 | molecular_function | zinc ion binding |
| Bj | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| BJ | 0003735 | molecular_function | structural constituent of ribosome |
| BJ | 0006412 | biological_process | translation |
| BJ | 0019843 | molecular_function | rRNA binding |
| BJ | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BJ | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| BK | 0003723 | molecular_function | RNA binding |
| BK | 0003735 | molecular_function | structural constituent of ribosome |
| BK | 0006412 | biological_process | translation |
| BK | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BK | 0042273 | biological_process | ribosomal large subunit biogenesis |
| Bl | 0006412 | biological_process | translation |
| Bl | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| BL | 0003735 | molecular_function | structural constituent of ribosome |
| BL | 0006412 | biological_process | translation |
| BL | 0019843 | molecular_function | rRNA binding |
| BL | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BM | 0002181 | biological_process | cytoplasmic translation |
| BM | 0003723 | molecular_function | RNA binding |
| BM | 0003735 | molecular_function | structural constituent of ribosome |
| BM | 0005737 | cellular_component | cytoplasm |
| BM | 0006412 | biological_process | translation |
| BM | 0019843 | molecular_function | rRNA binding |
| BM | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BN | 0006412 | biological_process | translation |
| BO | 0000027 | biological_process | ribosomal large subunit assembly |
| BO | 0003735 | molecular_function | structural constituent of ribosome |
| BO | 0006412 | biological_process | translation |
| BO | 0008097 | molecular_function | 5S rRNA binding |
| BO | 0019843 | molecular_function | rRNA binding |
| BO | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BP | 0003723 | molecular_function | RNA binding |
| BP | 0003735 | molecular_function | structural constituent of ribosome |
| BP | 0006412 | biological_process | translation |
| BP | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BQ | 0006412 | biological_process | translation |
| BQ | 0070180 | molecular_function | large ribosomal subunit rRNA binding |
| BR | 0006412 | biological_process | translation |
| BS | 0002181 | biological_process | cytoplasmic translation |
| BS | 0003735 | molecular_function | structural constituent of ribosome |
| BS | 0006412 | biological_process | translation |
| BS | 0019843 | molecular_function | rRNA binding |
| BS | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BT | 0006412 | biological_process | translation |
| BT | 0019843 | molecular_function | rRNA binding |
| BU | 0006412 | biological_process | translation |
| BU | 0019843 | molecular_function | rRNA binding |
| BV | 0006412 | biological_process | translation |
| BV | 0008270 | molecular_function | zinc ion binding |
| BV | 0019843 | molecular_function | rRNA binding |
| BW | 0006412 | biological_process | translation |
| BY | 0000463 | biological_process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| BY | 0003723 | molecular_function | RNA binding |
| BY | 0003735 | molecular_function | structural constituent of ribosome |
| BY | 0006412 | biological_process | translation |
| BY | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| BZ | 0006412 | biological_process | translation |
Functional Information from PROSITE/UniProt
| site_id | PS00028 |
| Number of Residues | 22 |
| Details | ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cpr..CgmvFkrrkdyikHvnka.H |
| Chain | Residue | Details |
| Bk | CYS20-HIS41 |
| site_id | PS00049 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIIrqrkeyrrl.DGmrikFedNaaVI |
| Chain | Residue | Details |
| BJ | ALA80-ILE106 |
| site_id | PS00050 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVKLKpeysaseI |
| Chain | Residue | Details |
| BT | LYS64-ILE79 |
| site_id | PS00051 |
| Number of Residues | 17 |
| Details | RIBOSOMAL_L39E Ribosomal protein L39e signature. KTnrrVltHpkrRHWRR |
| Chain | Residue | Details |
| Bf | LYS30-ARG46 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GilIVSTSqGVMshkeAR |
| Chain | Residue | Details |
| AI | GLY100-ARG117 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALarA.GLkIgrveDvTPiPHD |
| Chain | Residue | Details |
| AM | ILE102-ASP124 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDrVlIaEtRPLS |
| Chain | Residue | Details |
| AR | GLY83-SER95 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKefvpveIkpemIGhyLGEFapT |
| Chain | Residue | Details |
| AT | ASN85-THR109 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGfmGQaeAariAiARAL |
| Chain | Residue | Details |
| AK | GLY68-LEU86 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. AertGVrmsGPIpLPT |
| Chain | Residue | Details |
| AL | ALA27-THR42 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LrkHLeqhPkDlhSmrgLqlIeskirrLvkY |
| Chain | Residue | Details |
| AQ | LEU105-TYR135 |
| site_id | PS00464 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_L22 Ribosomal protein L22 signature. RgwYpRAfGRptpfneqtTHIEVvV |
| Chain | Residue | Details |
| BS | ARG126-VAL150 |
| site_id | PS00474 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L3 Ribosomal protein L3 signature. LkegellDviAvTkGKGtqGpvkR |
| Chain | Residue | Details |
| BC | LEU210-ARG233 |
| site_id | PS00475 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGtGkItkp..LvIkaraFSskAeekIkaaG |
| Chain | Residue | Details |
| BL | LYS111-GLY141 |
| site_id | PS00526 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L19E Ribosomal protein L19e signature. QRRVaAellkCGenrIWIDP |
| Chain | Residue | Details |
| BQ | GLN7-PRO26 |
| site_id | PS00527 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.Cgqygpiirihg.LMLCRhCFR |
| Chain | Residue | Details |
| AP | ARG23-ARG44 |
| site_id | PS00528 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPtsWyIeR |
| Chain | Residue | Details |
| AE | HIS9-ARG23 |
| site_id | PS00529 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. FGsyKSkGYAkYYYDkdrmlyiE |
| Chain | Residue | Details |
| B6 | PHE60-GLU82 |
| site_id | PS00578 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. IRGGtDkdGfPM |
| Chain | Residue | Details |
| AG | ILE63-MET74 |
| site_id | PS00579 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L29 Ribosomal protein L29 signature. NPMVIRnLRRDIARL |
| Chain | Residue | Details |
| BW | ASN40-LEU54 |
| site_id | PS00580 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_L32E Ribosomal protein L32e signature. FlRqewwRypKFkndpkWRRpkG |
| Chain | Residue | Details |
| Bb | PHE23-GLY45 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrvrFrVlaAVGNrd.GyVGlGighgr.EVgi.AI |
| Chain | Residue | Details |
| AF | GLY78-ILE110 |
| site_id | PS00628 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PerfykaGgsIiRkALQqLE |
| Chain | Residue | Details |
| AU | PRO87-GLU106 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtiVYKkglArTmrqARqLI |
| Chain | Residue | Details |
| AD | LEU101-ILE125 |
| site_id | PS00634 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_L30 Ribosomal protein L30 signature. TLamLrLhRvnHcVivddtpsylgMLqkAkdYI |
| Chain | Residue | Details |
| BY | THR22-ILE54 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHelGlpVRGQ |
| Chain | Residue | Details |
| AO | ARG116-GLN129 |
| site_id | PS00700 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QatrItkWdrRvFqDGIYIveK |
| Chain | Residue | Details |
| BF | GLN156-LYS177 |
| site_id | PS00709 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. TgkvilGsNetIRlaKtGgaKlIIV |
| Chain | Residue | Details |
| BZ | THR13-VAL37 |
| site_id | PS00712 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. VtSKkIRNrIAGYiTK |
| Chain | Residue | Details |
| AS | VAL41-LYS56 |
| site_id | PS00783 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMLPwktdrGRkafkrLkVYvG |
| Chain | Residue | Details |
| BI | ILE79-GLY102 |
| site_id | PS00939 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_L1E Ribosomal protein L1e signature. NkkeRrlAImSAIaATAnydivkaRGH |
| Chain | Residue | Details |
| BD | ASN106-HIS132 |
| site_id | PS00961 |
| Number of Residues | 9 |
| Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ETEREAReI |
| Chain | Residue | Details |
| AX | GLU59-ILE67 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. LdQYLAAGVHIG |
| Chain | Residue | Details |
| AB | LEU9-GLY20 |
| site_id | PS00963 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdvIIItDpraDhqaMkEaieiGIP |
| Chain | Residue | Details |
| AB | PRO112-PRO136 |
| site_id | PS00993 |
| Number of Residues | 21 |
| Details | RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTllGKpfvvasLaIvDpG |
| Chain | Residue | Details |
| BZ | GLU69-GLY89 |
| site_id | PS01073 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L24E Ribosomal protein L24e signature. YcGkpFePGtGkmFvRnD |
| Chain | Residue | Details |
| BV | TYR9-ASP26 |
| site_id | PS01077 |
| Number of Residues | 21 |
| Details | RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSlGkRnktptHirCrRCG |
| Chain | Residue | Details |
| Be | GLY4-GLY24 |
| site_id | PS01082 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CeekeIPYiyVpSKkeLG |
| Chain | Residue | Details |
| BG | CYS70-GLY87 |
| site_id | PS01105 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKIvRvHGtkGaVrArFekgLP |
| Chain | Residue | Details |
| Bc | GLY55-PRO76 |
| site_id | PS01106 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L18E Ribosomal protein L18e signature. WrLerPRrqRAeVNVsRI |
| Chain | Residue | Details |
| BP | TRP35-ILE52 |
| site_id | PS01108 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_L24 Ribosomal protein L24 signature. GDkVrIMrGdfKGhe.GkV |
| Chain | Residue | Details |
| BU | GLY49-VAL66 |
| site_id | PS01144 |
| Number of Residues | 15 |
| Details | RIBOSOMAL_L31E Ribosomal protein L31e signature. VIIStkVNeKiWeRG |
| Chain | Residue | Details |
| Ba | VAL48-GLY62 |
| site_id | PS01145 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_L34E Ribosomal protein L34e signature. SrSwRrkyvRTPGG |
| Chain | Residue | Details |
| Bd | SER7-GLY20 |
| site_id | PS01168 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCidCgneqivFShPatrvrCnvCGatLvePtG |
| Chain | Residue | Details |
| AW | LYS19-GLY51 |
| site_id | PS01171 |
| Number of Residues | 26 |
| Details | RIBOSOMAL_L21E Ribosomal protein L21e signature. GQrVhiviepsyhk.GmpDprFhGrTG |
| Chain | Residue | Details |
| BR | GLY38-GLY63 |
| site_id | PS01172 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_L44E Ribosomal protein L44e signature. KpVKKldLRfrC |
| Chain | Residue | Details |
| Bj | LYS60-CYS71 |
| site_id | PS01191 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. VlNRVvEvTLkDI |
| Chain | Residue | Details |
| AA | VAL44-ILE56 |
| site_id | PS01193 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RkpSGGrivla.RkKrKrELG |
| Chain | Residue | Details |
| AJ | ARG10-GLY29 |
| site_id | PS01194 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_L15E Ribosomal protein L15e signature. DRARaLGYqAkqGYVIVRvRVrRG |
| Chain | Residue | Details |
| BM | ASP46-GLY69 |
| site_id | PS01257 |
| Number of Residues | 22 |
| Details | RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRygnGMRrPFGKPiGlaARL |
| Chain | Residue | Details |
| BN | ALA105-LEU126 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI4 |
| Number of Residues | 71 |
| Details | Domain: {"description":"S4 RNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_01306","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 62 |
| Details | Domain: {"description":"S4 RNA-binding"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 63 |
| Details | Domain: {"description":"S5 DRBM","evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 234 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 27 |
| Details | Compositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 69 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01364","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 22 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00371","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00371","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 21 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00777","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00777","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 69 |
| Details | Domain: {"description":"KH type-2","evidences":[{"source":"HAMAP-Rule","id":"MF_01309","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 11 |
| Details | Compositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 9 |
| Details | Compositional bias: {"description":"Gly residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 18 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 21 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00327","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00327","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 30 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_00773","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00773","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 63 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"source":"HAMAP-Rule","id":"MF_01476","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01476","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00788","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |






