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9S3G

State 1 MAP3 RNA Pol II activated elongation complex with SETD2 and upstream hexasome

Functional Information from GO Data
ChainGOidnamespacecontents
A0000428cellular_componentDNA-directed RNA polymerase complex
A0001172biological_processRNA-templated transcription
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003899molecular_functionDNA-directed RNA polymerase activity
A0003968molecular_functionRNA-directed RNA polymerase activity
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005694cellular_componentchromosome
A0005737cellular_componentcytoplasm
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0000428cellular_componentDNA-directed RNA polymerase complex
B0000781cellular_componentchromosome, telomeric region
B0001172biological_processRNA-templated transcription
B0003682molecular_functionchromatin binding
B0003899molecular_functionDNA-directed RNA polymerase activity
B0003968molecular_functionRNA-directed RNA polymerase activity
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005665cellular_componentRNA polymerase II, core complex
B0006354biological_processDNA-templated transcription elongation
B0006366biological_processtranscription by RNA polymerase II
B0006367biological_processtranscription initiation at RNA polymerase II promoter
B0006368biological_processtranscription elongation by RNA polymerase II
B0008270molecular_functionzinc ion binding
B0016740molecular_functiontransferase activity
B0016779molecular_functionnucleotidyltransferase activity
B0016787molecular_functionhydrolase activity
B0034062molecular_function5'-3' RNA polymerase activity
B0046872molecular_functionmetal ion binding
C0000428cellular_componentDNA-directed RNA polymerase complex
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005665cellular_componentRNA polymerase II, core complex
C0006366biological_processtranscription by RNA polymerase II
C0006367biological_processtranscription initiation at RNA polymerase II promoter
C0006368biological_processtranscription elongation by RNA polymerase II
C0046872molecular_functionmetal ion binding
E0000428cellular_componentDNA-directed RNA polymerase complex
E0003899molecular_functionDNA-directed RNA polymerase activity
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005665cellular_componentRNA polymerase II, core complex
E0005666cellular_componentRNA polymerase III complex
E0005736cellular_componentRNA polymerase I complex
E0006362biological_processtranscription elongation by RNA polymerase I
E0006366biological_processtranscription by RNA polymerase II
E0042797biological_processtRNA transcription by RNA polymerase III
F0000428cellular_componentDNA-directed RNA polymerase complex
F0001650cellular_componentfibrillar center
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005665cellular_componentRNA polymerase II, core complex
F0005666cellular_componentRNA polymerase III complex
F0005736cellular_componentRNA polymerase I complex
F0006362biological_processtranscription elongation by RNA polymerase I
F0006366biological_processtranscription by RNA polymerase II
F0006367biological_processtranscription initiation at RNA polymerase II promoter
F0006368biological_processtranscription elongation by RNA polymerase II
F0006383biological_processtranscription by RNA polymerase III
F0006384biological_processtranscription initiation at RNA polymerase III promoter
F0006386biological_processtermination of RNA polymerase III transcription
G0000428cellular_componentDNA-directed RNA polymerase complex
G0005634cellular_componentnucleus
G0006352biological_processDNA-templated transcription initiation
H0000428cellular_componentDNA-directed RNA polymerase complex
H0003899molecular_functionDNA-directed RNA polymerase activity
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005665cellular_componentRNA polymerase II, core complex
H0005666cellular_componentRNA polymerase III complex
H0005736cellular_componentRNA polymerase I complex
H0006351biological_processDNA-templated transcription
I0000428cellular_componentDNA-directed RNA polymerase complex
I0001193biological_processmaintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
I0003899molecular_functionDNA-directed RNA polymerase activity
I0005634cellular_componentnucleus
I0005654cellular_componentnucleoplasm
I0005665cellular_componentRNA polymerase II, core complex
I0005730cellular_componentnucleolus
I0006283biological_processtranscription-coupled nucleotide-excision repair
I0006366biological_processtranscription by RNA polymerase II
I0006367biological_processtranscription initiation at RNA polymerase II promoter
I0006368biological_processtranscription elongation by RNA polymerase II
I0008270molecular_functionzinc ion binding
I0046872molecular_functionmetal ion binding
J0000428cellular_componentDNA-directed RNA polymerase complex
J0005634cellular_componentnucleus
J0005665cellular_componentRNA polymerase II, core complex
J0008270molecular_functionzinc ion binding
J0046872molecular_functionmetal ion binding
K0000428cellular_componentDNA-directed RNA polymerase complex
K0003899molecular_functionDNA-directed RNA polymerase activity
K0005634cellular_componentnucleus
K0005665cellular_componentRNA polymerase II, core complex
K0006366biological_processtranscription by RNA polymerase II
L0000428cellular_componentDNA-directed RNA polymerase complex
L0001650cellular_componentfibrillar center
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005665cellular_componentRNA polymerase II, core complex
L0005666cellular_componentRNA polymerase III complex
L0005730cellular_componentnucleolus
L0005736cellular_componentRNA polymerase I complex
L0006362biological_processtranscription elongation by RNA polymerase I
L0006366biological_processtranscription by RNA polymerase II
L0006367biological_processtranscription initiation at RNA polymerase II promoter
L0006368biological_processtranscription elongation by RNA polymerase II
L0006383biological_processtranscription by RNA polymerase III
L0006384biological_processtranscription initiation at RNA polymerase III promoter
L0006386biological_processtermination of RNA polymerase III transcription
L0008270molecular_functionzinc ion binding
L0046872molecular_functionmetal ion binding
M0003723molecular_functionRNA binding
M0005515molecular_functionprotein binding
M0005634cellular_componentnucleus
M0005654cellular_componentnucleoplasm
M0006351biological_processDNA-templated transcription
M0006368biological_processtranscription elongation by RNA polymerase II
M0006397biological_processmRNA processing
M0008023cellular_componenttranscription elongation factor complex
M0008380biological_processRNA splicing
M0031491molecular_functionnucleosome binding
M0034728biological_processnucleosome organization
M0042393molecular_functionhistone binding
M0045191biological_processregulation of isotype switching
M0051028biological_processmRNA transport
M0051147biological_processregulation of muscle cell differentiation
M0140673biological_processtranscription elongation-coupled chromatin remodeling
Q0000122biological_processnegative regulation of transcription by RNA polymerase II
Q0000791cellular_componenteuchromatin
Q0000993molecular_functionRNA polymerase II complex binding
Q0001711biological_processendodermal cell fate commitment
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005654cellular_componentnucleoplasm
Q0006325biological_processchromatin organization
Q0006351biological_processDNA-templated transcription
Q0006357biological_processregulation of transcription by RNA polymerase II
Q0006368biological_processtranscription elongation by RNA polymerase II
Q0007259biological_processcell surface receptor signaling pathway via JAK-STAT
Q0016055biological_processWnt signaling pathway
Q0016593cellular_componentCdc73/Paf1 complex
Q0016607cellular_componentnuclear speck
Q0019827biological_processstem cell population maintenance
Q0042169molecular_functionSH2 domain binding
Q0045638biological_processnegative regulation of myeloid cell differentiation
Q0045944biological_processpositive regulation of transcription by RNA polymerase II
Q0070102biological_processinterleukin-6-mediated signaling pathway
Q0071222biological_processcellular response to lipopolysaccharide
R0000122biological_processnegative regulation of transcription by RNA polymerase II
R0001711biological_processendodermal cell fate commitment
R0003677molecular_functionDNA binding
R0003697molecular_functionsingle-stranded DNA binding
R0003723molecular_functionRNA binding
R0005515molecular_functionprotein binding
R0005634cellular_componentnucleus
R0005654cellular_componentnucleoplasm
R0005730cellular_componentnucleolus
R0006325biological_processchromatin organization
R0006351biological_processDNA-templated transcription
R0006368biological_processtranscription elongation by RNA polymerase II
R0016055biological_processWnt signaling pathway
R0016593cellular_componentCdc73/Paf1 complex
R0019827biological_processstem cell population maintenance
S0003677molecular_functionDNA binding
S0003711molecular_functiontranscription elongation factor activity
S0005515molecular_functionprotein binding
S0005634cellular_componentnucleus
S0005654cellular_componentnucleoplasm
S0005669cellular_componenttranscription factor TFIID complex
S0006351biological_processDNA-templated transcription
S0006368biological_processtranscription elongation by RNA polymerase II
S0008270molecular_functionzinc ion binding
S0046872molecular_functionmetal ion binding
U0001650cellular_componentfibrillar center
U0001711biological_processendodermal cell fate commitment
U0005515molecular_functionprotein binding
U0005634cellular_componentnucleus
U0005654cellular_componentnucleoplasm
U0006351biological_processDNA-templated transcription
U0006368biological_processtranscription elongation by RNA polymerase II
U0016055biological_processWnt signaling pathway
U0016593cellular_componentCdc73/Paf1 complex
U0019827biological_processstem cell population maintenance
U0031124biological_processmRNA 3'-end processing
U0032968biological_processpositive regulation of transcription elongation by RNA polymerase II
U0045638biological_processnegative regulation of myeloid cell differentiation
U0045944biological_processpositive regulation of transcription by RNA polymerase II
U1990269molecular_functionRNA polymerase II C-terminal domain phosphoserine binding
V0000122biological_processnegative regulation of transcription by RNA polymerase II
V0000993molecular_functionRNA polymerase II complex binding
V0001650cellular_componentfibrillar center
V0001711biological_processendodermal cell fate commitment
V0003682molecular_functionchromatin binding
V0005515molecular_functionprotein binding
V0005634cellular_componentnucleus
V0005654cellular_componentnucleoplasm
V0005737cellular_componentcytoplasm
V0006351biological_processDNA-templated transcription
V0006368biological_processtranscription elongation by RNA polymerase II
V0016020cellular_componentmembrane
V0016055biological_processWnt signaling pathway
V0016593cellular_componentCdc73/Paf1 complex
V0019827biological_processstem cell population maintenance
V0031124biological_processmRNA 3'-end processing
V0034504biological_processprotein localization to nucleus
V0045638biological_processnegative regulation of myeloid cell differentiation
V0045944biological_processpositive regulation of transcription by RNA polymerase II
V0071222biological_processcellular response to lipopolysaccharide
V1902808biological_processpositive regulation of cell cycle G1/S phase transition
W0000791cellular_componenteuchromatin
W0000956biological_processnuclear-transcribed mRNA catabolic process
W0005515molecular_functionprotein binding
W0005634cellular_componentnucleus
W0005654cellular_componentnucleoplasm
W0005737cellular_componentcytoplasm
W0005829cellular_componentcytosol
W0006351biological_processDNA-templated transcription
W0006368biological_processtranscription elongation by RNA polymerase II
W0016055biological_processWnt signaling pathway
W0016593cellular_componentCdc73/Paf1 complex
W0045638biological_processnegative regulation of myeloid cell differentiation
W0055087cellular_componentSki complex
W0070478biological_processnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
W0072344biological_processrescue of stalled ribosome
X0000122biological_processnegative regulation of transcription by RNA polymerase II
X0000781cellular_componentchromosome, telomeric region
X0000993molecular_functionRNA polymerase II complex binding
X0001711biological_processendodermal cell fate commitment
X0005515molecular_functionprotein binding
X0005634cellular_componentnucleus
X0005654cellular_componentnucleoplasm
X0006351biological_processDNA-templated transcription
X0006368biological_processtranscription elongation by RNA polymerase II
X0008285biological_processnegative regulation of cell population proliferation
X0016055biological_processWnt signaling pathway
X0016593cellular_componentCdc73/Paf1 complex
X0019827biological_processstem cell population maintenance
X0030177biological_processpositive regulation of Wnt signaling pathway
X0031124biological_processmRNA 3'-end processing
X0031442biological_processpositive regulation of mRNA 3'-end processing
X0031648biological_processprotein destabilization
X0032968biological_processpositive regulation of transcription elongation by RNA polymerase II
X0045638biological_processnegative regulation of myeloid cell differentiation
X0045944biological_processpositive regulation of transcription by RNA polymerase II
X0048147biological_processnegative regulation of fibroblast proliferation
X0050680biological_processnegative regulation of epithelial cell proliferation
X0071222biological_processcellular response to lipopolysaccharide
X1902808biological_processpositive regulation of cell cycle G1/S phase transition
X2000134biological_processnegative regulation of G1/S transition of mitotic cell cycle
Y0000122biological_processnegative regulation of transcription by RNA polymerase II
Y0000993molecular_functionRNA polymerase II complex binding
Y0005634cellular_componentnucleus
Y0006351biological_processDNA-templated transcription
Y0006368biological_processtranscription elongation by RNA polymerase II
Y0008270molecular_functionzinc ion binding
Y0032044cellular_componentDSIF complex
Y0032785biological_processnegative regulation of DNA-templated transcription, elongation
Y0032786biological_processpositive regulation of DNA-templated transcription, elongation
Y0034243biological_processregulation of transcription elongation by RNA polymerase II
Y0045944biological_processpositive regulation of transcription by RNA polymerase II
Y0046872molecular_functionmetal ion binding
Y0046982molecular_functionprotein heterodimerization activity
Y0140870molecular_functionRNA polymerase inhibitor activity
Y0160239biological_processtranscription pausing by RNA polymerase II
Z0000122biological_processnegative regulation of transcription by RNA polymerase II
Z0003723molecular_functionRNA binding
Z0003729molecular_functionmRNA binding
Z0005515molecular_functionprotein binding
Z0005634cellular_componentnucleus
Z0005654cellular_componentnucleoplasm
Z0006351biological_processDNA-templated transcription
Z0006368biological_processtranscription elongation by RNA polymerase II
Z0016239biological_processpositive regulation of macroautophagy
Z0019899molecular_functionenzyme binding
Z0032044cellular_componentDSIF complex
Z0032785biological_processnegative regulation of DNA-templated transcription, elongation
Z0032786biological_processpositive regulation of DNA-templated transcription, elongation
Z0032968biological_processpositive regulation of transcription elongation by RNA polymerase II
Z0034243biological_processregulation of transcription elongation by RNA polymerase II
Z0045944biological_processpositive regulation of transcription by RNA polymerase II
Z0046982molecular_functionprotein heterodimerization activity
Z0140870molecular_functionRNA polymerase inhibitor activity
Z0160239biological_processtranscription pausing by RNA polymerase II
a0000786cellular_componentnucleosome
a0003677molecular_functionDNA binding
a0005515molecular_functionprotein binding
a0005576cellular_componentextracellular region
a0005634cellular_componentnucleus
a0005654cellular_componentnucleoplasm
a0005694cellular_componentchromosome
a0006325biological_processchromatin organization
a0006334biological_processnucleosome assembly
a0030527molecular_functionstructural constituent of chromatin
a0031492molecular_functionnucleosomal DNA binding
a0031507biological_processheterochromatin formation
a0070062cellular_componentextracellular exosome
b0000781cellular_componentchromosome, telomeric region
b0000786cellular_componentnucleosome
b0003677molecular_functionDNA binding
b0003723molecular_functionRNA binding
b0005515molecular_functionprotein binding
b0005576cellular_componentextracellular region
b0005634cellular_componentnucleus
b0005654cellular_componentnucleoplasm
b0005694cellular_componentchromosome
b0006325biological_processchromatin organization
b0006334biological_processnucleosome assembly
b0016020cellular_componentmembrane
b0030527molecular_functionstructural constituent of chromatin
b0032200biological_processtelomere organization
b0032991cellular_componentprotein-containing complex
b0045653biological_processnegative regulation of megakaryocyte differentiation
b0061644biological_processprotein localization to CENP-A containing chromatin
b0070062cellular_componentextracellular exosome
e0000786cellular_componentnucleosome
e0003677molecular_functionDNA binding
e0005515molecular_functionprotein binding
e0005576cellular_componentextracellular region
e0005634cellular_componentnucleus
e0005654cellular_componentnucleoplasm
e0005694cellular_componentchromosome
e0006325biological_processchromatin organization
e0006334biological_processnucleosome assembly
e0030527molecular_functionstructural constituent of chromatin
e0031492molecular_functionnucleosomal DNA binding
e0031507biological_processheterochromatin formation
e0070062cellular_componentextracellular exosome
f0000781cellular_componentchromosome, telomeric region
f0000786cellular_componentnucleosome
f0003677molecular_functionDNA binding
f0003723molecular_functionRNA binding
f0005515molecular_functionprotein binding
f0005576cellular_componentextracellular region
f0005634cellular_componentnucleus
f0005654cellular_componentnucleoplasm
f0005694cellular_componentchromosome
f0006325biological_processchromatin organization
f0006334biological_processnucleosome assembly
f0016020cellular_componentmembrane
f0030527molecular_functionstructural constituent of chromatin
f0032200biological_processtelomere organization
f0032991cellular_componentprotein-containing complex
f0045653biological_processnegative regulation of megakaryocyte differentiation
f0061644biological_processprotein localization to CENP-A containing chromatin
f0070062cellular_componentextracellular exosome
g0000786cellular_componentnucleosome
g0003677molecular_functionDNA binding
g0005515molecular_functionprotein binding
g0005634cellular_componentnucleus
g0005654cellular_componentnucleoplasm
g0005694cellular_componentchromosome
g0006325biological_processchromatin organization
g0008285biological_processnegative regulation of cell population proliferation
g0030527molecular_functionstructural constituent of chromatin
g0031507biological_processheterochromatin formation
g0061644biological_processprotein localization to CENP-A containing chromatin
g0070062cellular_componentextracellular exosome
h0000786cellular_componentnucleosome
h0002227biological_processinnate immune response in mucosa
h0003677molecular_functionDNA binding
h0005515molecular_functionprotein binding
h0005615cellular_componentextracellular space
h0005634cellular_componentnucleus
h0005654cellular_componentnucleoplasm
h0005694cellular_componentchromosome
h0006325biological_processchromatin organization
h0019731biological_processantibacterial humoral response
h0030527molecular_functionstructural constituent of chromatin
h0031640biological_processkilling of cells of another organism
h0042742biological_processdefense response to bacterium
h0050829biological_processdefense response to Gram-negative bacterium
h0050830biological_processdefense response to Gram-positive bacterium
h0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
j0003723molecular_functionRNA binding
j0005634cellular_componentnucleus
j0005654cellular_componentnucleoplasm
j0005694cellular_componentchromosome
j0006260biological_processDNA replication
j0006281biological_processDNA repair
j0006334biological_processnucleosome assembly
j0006337biological_processnucleosome disassembly
j0006351biological_processDNA-templated transcription
j0006366biological_processtranscription by RNA polymerase II
j0006974biological_processDNA damage response
j0008023cellular_componenttranscription elongation factor complex
j0031491molecular_functionnucleosome binding
j0032784biological_processregulation of DNA-templated transcription elongation
j0032786biological_processpositive regulation of DNA-templated transcription, elongation
j0035101cellular_componentFACT complex
k0003677molecular_functionDNA binding
k0003682molecular_functionchromatin binding
k0003723molecular_functionRNA binding
k0005515molecular_functionprotein binding
k0005634cellular_componentnucleus
k0005654cellular_componentnucleoplasm
k0005694cellular_componentchromosome
k0005730cellular_componentnucleolus
k0006260biological_processDNA replication
k0006281biological_processDNA repair
k0006334biological_processnucleosome assembly
k0006337biological_processnucleosome disassembly
k0006351biological_processDNA-templated transcription
k0006974biological_processDNA damage response
k0031491molecular_functionnucleosome binding
k0035101cellular_componentFACT complex
k0042393molecular_functionhistone binding
k1902275biological_processregulation of chromatin organization
Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DNDPSDYVEqdDI
ChainResidueDetails
CASP136-ILE148

site_idPS00046
Number of Residues7
DetailsHISTONE_H2A Histone H2A signature. AGLqFPV
ChainResidueDetails
gALA22-VAL28

site_idPS00047
Number of Residues5
DetailsHISTONE_H4 Histone H4 signature. GAKRH
ChainResidueDetails
bGLY15-HIS19

site_idPS00115
Number of Residues7
DetailsRNA_POL_II_REPEAT Eukaryotic RNA polymerase II heptapeptide repeat. YSPTSPA
ChainResidueDetails
ATYR1593-ALA1599
ATYR1671-SER1677
ATYR1678-SER1684
ATYR1685-SER1691
ATYR1692-SER1698
ATYR1699-SER1705
ATYR1706-SER1712
ATYR1713-SER1719
ATYR1720-SER1726
ATYR1727-SER1733
ATYR1734-SER1740
ATYR1615-SER1621
ATYR1741-ASN1747
ATYR1748-ASN1754
ATYR1755-SER1761
ATYR1762-SER1768
ATYR1769-ASN1775
ATYR1776-ASN1782
ATYR1783-SER1789
ATYR1790-SER1796
ATYR1797-SER1803
ATYR1818-SER1824
ATYR1622-SER1628
ATYR1825-SER1831
ATYR1832-LYS1838
ATYR1839-SER1845
ATYR1853-LYS1859
ATYR1860-LYS1866
ATYR1867-LYS1873
ATYR1874-THR1880
ATYR1888-THR1894
ATYR1902-LYS1908
ATYR1909-THR1915
ATYR1629-ASN1635
ATYR1916-LYS1922
ATYR1923-THR1929
ATYR1930-LYS1936
ATYR1947-THR1953
ATYR1636-SER1642
ATYR1643-SER1649
ATYR1650-SER1656
ATYR1657-SER1663
ATYR1664-SER1670

site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YVCTAPH
ChainResidueDetails
ITYR112-HIS118

site_idPS00322
Number of Residues7
DetailsHISTONE_H3_1 Histone H3 signature 1. KAPRKQL
ChainResidueDetails
aLYS15-LEU21

site_idPS00357
Number of Residues23
DetailsHISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
ChainResidueDetails
hARG93-GLY115

site_idPS00446
Number of Residues41
DetailsRNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSIRRvfiaevpiiAidwVqidaNsSvlhDEfIAhRLGLIP
ChainResidueDetails
CASN32-PRO72

site_idPS00466
Number of Residues36
DetailsZF_TFIIS_1 Zinc finger TFIIS-type signature. CgkCkkknctytqVQTRSaDEPmttfvvCne...CgnrW
ChainResidueDetails
SCYS263-TRP298
ICYS86-TRP123

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. AASSslDaHIRLWDL
ChainResidueDetails
WALA79-LEU93

site_idPS00959
Number of Residues9
DetailsHISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
ChainResidueDetails
aPRO67-ILE75

site_idPS01030
Number of Residues27
DetailsRNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCQECNNMLypkedkenrillyaCrnC
ChainResidueDetails
IPHE16-CYS42

site_idPS01110
Number of Residues14
DetailsRNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPEHvvMtkEE
ChainResidueDetails
EHIS142-GLU155

site_idPS01111
Number of Residues15
DetailsRNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARvLGtRAlQ
ChainResidueDetails
FTHR58-GLN72

site_idPS01112
Number of Residues10
DetailsRNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFTCG
ChainResidueDetails
JILE2-GLY11

site_idPS01154
Number of Residues32
DetailsRNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. InkEdHTLgNiIksqLlkdpqVlfagYkvpHP
ChainResidueDetails
KILE35-PRO66

site_idPS01159
Number of Residues26
DetailsWW_DOMAIN_1 WW/rsp5/WWP domain signature. WktardpegkiyYYhvitrq.TQWDPP
ChainResidueDetails
OTRP2395-PRO2420

site_idPS01166
Number of Residues13
DetailsRNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT
ChainResidueDetails
BGLY932-THR944

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI9
Number of Residues45
DetailsZinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues42
DetailsZinc finger: {"description":"TFIIS-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10145","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues6
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues34
DetailsRepeat: {"description":"TPR 1"}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues33
DetailsRepeat: {"description":"TPR 2"}
ChainResidueDetails

site_idSWS_FT_FI17
Number of Residues33
DetailsRepeat: {"description":"TPR 3"}
ChainResidueDetails

site_idSWS_FT_FI18
Number of Residues33
DetailsRepeat: {"description":"TPR 4"}
ChainResidueDetails

site_idSWS_FT_FI19
Number of Residues33
DetailsRepeat: {"description":"TPR 5"}
ChainResidueDetails

site_idSWS_FT_FI20
Number of Residues33
DetailsRepeat: {"description":"TPR 6"}
ChainResidueDetails

site_idSWS_FT_FI21
Number of Residues33
DetailsRepeat: {"description":"TPR 7"}
ChainResidueDetails

site_idSWS_FT_FI22
Number of Residues32
DetailsRepeat: {"description":"TPR 8"}
ChainResidueDetails

site_idSWS_FT_FI23
Number of Residues33
DetailsRepeat: {"description":"TPR 9"}
ChainResidueDetails

site_idSWS_FT_FI24
Number of Residues33
DetailsRepeat: {"description":"TPR 10"}
ChainResidueDetails

site_idSWS_FT_FI25
Number of Residues33
DetailsRepeat: {"description":"TPR 11"}
ChainResidueDetails

site_idSWS_FT_FI26
Number of Residues32
DetailsRepeat: {"description":"TPR 12"}
ChainResidueDetails

site_idSWS_FT_FI27
Number of Residues33
DetailsRepeat: {"description":"TPR 13"}
ChainResidueDetails

site_idSWS_FT_FI28
Number of Residues33
DetailsRepeat: {"description":"TPR 14"}
ChainResidueDetails

site_idSWS_FT_FI29
Number of Residues33
DetailsRepeat: {"description":"TPR 15"}
ChainResidueDetails

site_idSWS_FT_FI30
Number of Residues33
DetailsRepeat: {"description":"TPR 16"}
ChainResidueDetails

site_idSWS_FT_FI31
Number of Residues43
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails

site_idSWS_FT_FI32
Number of Residues39
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails

site_idSWS_FT_FI33
Number of Residues39
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails

site_idSWS_FT_FI34
Number of Residues41
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails

site_idSWS_FT_FI35
Number of Residues39
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails

site_idSWS_FT_FI36
Number of Residues39
DetailsRepeat: {"description":"WD 6"}
ChainResidueDetails

site_idSWS_FT_FI37
Number of Residues33
DetailsRepeat: {"description":"WD 7"}
ChainResidueDetails

site_idSWS_FT_FI38
Number of Residues1
DetailsModified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI39
Number of Residues1
DetailsModified residue: {"description":"N-acetylthreonine; in WD repeat-containing protein 61, N-terminally processed","evidences":[{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI40
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI41
Number of Residues38
DetailsRegion: {"description":"Interaction with SUPT5H","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI42
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P63272","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI43
Number of Residues1
DetailsModified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P63272","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI44
Number of Residues33
DetailsDomain: {"description":"KOW 1"}
ChainResidueDetails

site_idSWS_FT_FI45
Number of Residues31
DetailsDomain: {"description":"KOW 2"}
ChainResidueDetails

site_idSWS_FT_FI46
Number of Residues31
DetailsDomain: {"description":"KOW 3"}
ChainResidueDetails

site_idSWS_FT_FI47
Number of Residues33
DetailsDomain: {"description":"KOW 4"}
ChainResidueDetails

site_idSWS_FT_FI48
Number of Residues33
DetailsDomain: {"description":"KOW 5"}
ChainResidueDetails

site_idSWS_FT_FI49
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"28892040","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5OIK","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI50
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI51
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"O55201","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI52
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19783980","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI53
Number of Residues11
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI54
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI55
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI56
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29211711","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI57
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI58
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI59
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI60
Number of Residues4
DetailsModified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"PubMed","id":"31542297","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI61
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27436229","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI62
Number of Residues2
DetailsLipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"PubMed","id":"21076176","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI63
Number of Residues2
DetailsModified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"PubMed","id":"17267393","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI64
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"PubMed","id":"21724829","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI65
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI66
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI67
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI68
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI69
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"PubMed","id":"30886146","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI70
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"19818714","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI71
Number of Residues5
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI72
Number of Residues1
DetailsModified residue: {"description":"N6-crotonyllysine; alternate","evidences":[{"source":"PubMed","id":"21925322","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI73
Number of Residues2
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI74
Number of Residues1
DetailsModified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"24352239","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI75
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI76
Number of Residues1
DetailsModified residue: {"description":"PolyADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI77
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"UniProtKB","id":"Q8CGP1","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI78
Number of Residues2
DetailsModified residue: {"description":"N6-lactoyllysine; alternate","evidences":[{"source":"PubMed","id":"31645732","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI79
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI80
Number of Residues1
DetailsModified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI81
Number of Residues1
DetailsModified residue: {"description":"Dimethylated arginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI82
Number of Residues2
DetailsModified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI83
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q00729","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI84
Number of Residues1
DetailsGlycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI85
Number of Residues1
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"21726816","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI86
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"16307923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16713563","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI87
Number of Residues15
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI88
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI89
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI90
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI91
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI92
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI93
Number of Residues5
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI94
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"25218447","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"25772364","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI95
Number of Residues1
DetailsModified residue: {"description":"N-acetylalanine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2008","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Vousden K.H.","Lukashchuk N."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI96
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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