9S3G
State 1 MAP3 RNA Pol II activated elongation complex with SETD2 and upstream hexasome
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| A | 0001172 | biological_process | RNA-templated transcription |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| A | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005694 | cellular_component | chromosome |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| B | 0000781 | cellular_component | chromosome, telomeric region |
| B | 0001172 | biological_process | RNA-templated transcription |
| B | 0003682 | molecular_function | chromatin binding |
| B | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| B | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005654 | cellular_component | nucleoplasm |
| B | 0005665 | cellular_component | RNA polymerase II, core complex |
| B | 0006354 | biological_process | DNA-templated transcription elongation |
| B | 0006366 | biological_process | transcription by RNA polymerase II |
| B | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| B | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| C | 0005634 | cellular_component | nucleus |
| C | 0005654 | cellular_component | nucleoplasm |
| C | 0005665 | cellular_component | RNA polymerase II, core complex |
| C | 0006366 | biological_process | transcription by RNA polymerase II |
| C | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| C | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| C | 0046872 | molecular_function | metal ion binding |
| E | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| E | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005665 | cellular_component | RNA polymerase II, core complex |
| E | 0005666 | cellular_component | RNA polymerase III complex |
| E | 0005736 | cellular_component | RNA polymerase I complex |
| E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| E | 0006366 | biological_process | transcription by RNA polymerase II |
| E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
| F | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| F | 0001650 | cellular_component | fibrillar center |
| F | 0005634 | cellular_component | nucleus |
| F | 0005654 | cellular_component | nucleoplasm |
| F | 0005665 | cellular_component | RNA polymerase II, core complex |
| F | 0005666 | cellular_component | RNA polymerase III complex |
| F | 0005736 | cellular_component | RNA polymerase I complex |
| F | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| F | 0006366 | biological_process | transcription by RNA polymerase II |
| F | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| F | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| F | 0006383 | biological_process | transcription by RNA polymerase III |
| F | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
| F | 0006386 | biological_process | termination of RNA polymerase III transcription |
| G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| G | 0005634 | cellular_component | nucleus |
| G | 0006352 | biological_process | DNA-templated transcription initiation |
| H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| H | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| H | 0005634 | cellular_component | nucleus |
| H | 0005654 | cellular_component | nucleoplasm |
| H | 0005665 | cellular_component | RNA polymerase II, core complex |
| H | 0005666 | cellular_component | RNA polymerase III complex |
| H | 0005736 | cellular_component | RNA polymerase I complex |
| H | 0006351 | biological_process | DNA-templated transcription |
| I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| I | 0001193 | biological_process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II |
| I | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| I | 0005634 | cellular_component | nucleus |
| I | 0005654 | cellular_component | nucleoplasm |
| I | 0005665 | cellular_component | RNA polymerase II, core complex |
| I | 0005730 | cellular_component | nucleolus |
| I | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
| I | 0006366 | biological_process | transcription by RNA polymerase II |
| I | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| I | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| I | 0008270 | molecular_function | zinc ion binding |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| J | 0005634 | cellular_component | nucleus |
| J | 0005665 | cellular_component | RNA polymerase II, core complex |
| J | 0008270 | molecular_function | zinc ion binding |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| K | 0003899 | molecular_function | DNA-directed RNA polymerase activity |
| K | 0005634 | cellular_component | nucleus |
| K | 0005665 | cellular_component | RNA polymerase II, core complex |
| K | 0006366 | biological_process | transcription by RNA polymerase II |
| L | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
| L | 0001650 | cellular_component | fibrillar center |
| L | 0005634 | cellular_component | nucleus |
| L | 0005654 | cellular_component | nucleoplasm |
| L | 0005665 | cellular_component | RNA polymerase II, core complex |
| L | 0005666 | cellular_component | RNA polymerase III complex |
| L | 0005730 | cellular_component | nucleolus |
| L | 0005736 | cellular_component | RNA polymerase I complex |
| L | 0006362 | biological_process | transcription elongation by RNA polymerase I |
| L | 0006366 | biological_process | transcription by RNA polymerase II |
| L | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
| L | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| L | 0006383 | biological_process | transcription by RNA polymerase III |
| L | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
| L | 0006386 | biological_process | termination of RNA polymerase III transcription |
| L | 0008270 | molecular_function | zinc ion binding |
| L | 0046872 | molecular_function | metal ion binding |
| M | 0003723 | molecular_function | RNA binding |
| M | 0005515 | molecular_function | protein binding |
| M | 0005634 | cellular_component | nucleus |
| M | 0005654 | cellular_component | nucleoplasm |
| M | 0006351 | biological_process | DNA-templated transcription |
| M | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| M | 0006397 | biological_process | mRNA processing |
| M | 0008023 | cellular_component | transcription elongation factor complex |
| M | 0008380 | biological_process | RNA splicing |
| M | 0031491 | molecular_function | nucleosome binding |
| M | 0034728 | biological_process | nucleosome organization |
| M | 0042393 | molecular_function | histone binding |
| M | 0045191 | biological_process | regulation of isotype switching |
| M | 0051028 | biological_process | mRNA transport |
| M | 0051147 | biological_process | regulation of muscle cell differentiation |
| M | 0140673 | biological_process | transcription elongation-coupled chromatin remodeling |
| Q | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Q | 0000791 | cellular_component | euchromatin |
| Q | 0000993 | molecular_function | RNA polymerase II complex binding |
| Q | 0001711 | biological_process | endodermal cell fate commitment |
| Q | 0005515 | molecular_function | protein binding |
| Q | 0005634 | cellular_component | nucleus |
| Q | 0005654 | cellular_component | nucleoplasm |
| Q | 0006325 | biological_process | chromatin organization |
| Q | 0006351 | biological_process | DNA-templated transcription |
| Q | 0006357 | biological_process | regulation of transcription by RNA polymerase II |
| Q | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Q | 0007259 | biological_process | cell surface receptor signaling pathway via JAK-STAT |
| Q | 0016055 | biological_process | Wnt signaling pathway |
| Q | 0016593 | cellular_component | Cdc73/Paf1 complex |
| Q | 0016607 | cellular_component | nuclear speck |
| Q | 0019827 | biological_process | stem cell population maintenance |
| Q | 0042169 | molecular_function | SH2 domain binding |
| Q | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| Q | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Q | 0070102 | biological_process | interleukin-6-mediated signaling pathway |
| Q | 0071222 | biological_process | cellular response to lipopolysaccharide |
| R | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| R | 0001711 | biological_process | endodermal cell fate commitment |
| R | 0003677 | molecular_function | DNA binding |
| R | 0003697 | molecular_function | single-stranded DNA binding |
| R | 0003723 | molecular_function | RNA binding |
| R | 0005515 | molecular_function | protein binding |
| R | 0005634 | cellular_component | nucleus |
| R | 0005654 | cellular_component | nucleoplasm |
| R | 0005730 | cellular_component | nucleolus |
| R | 0006325 | biological_process | chromatin organization |
| R | 0006351 | biological_process | DNA-templated transcription |
| R | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| R | 0016055 | biological_process | Wnt signaling pathway |
| R | 0016593 | cellular_component | Cdc73/Paf1 complex |
| R | 0019827 | biological_process | stem cell population maintenance |
| S | 0003677 | molecular_function | DNA binding |
| S | 0003711 | molecular_function | transcription elongation factor activity |
| S | 0005515 | molecular_function | protein binding |
| S | 0005634 | cellular_component | nucleus |
| S | 0005654 | cellular_component | nucleoplasm |
| S | 0005669 | cellular_component | transcription factor TFIID complex |
| S | 0006351 | biological_process | DNA-templated transcription |
| S | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| S | 0008270 | molecular_function | zinc ion binding |
| S | 0046872 | molecular_function | metal ion binding |
| U | 0001650 | cellular_component | fibrillar center |
| U | 0001711 | biological_process | endodermal cell fate commitment |
| U | 0005515 | molecular_function | protein binding |
| U | 0005634 | cellular_component | nucleus |
| U | 0005654 | cellular_component | nucleoplasm |
| U | 0006351 | biological_process | DNA-templated transcription |
| U | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| U | 0016055 | biological_process | Wnt signaling pathway |
| U | 0016593 | cellular_component | Cdc73/Paf1 complex |
| U | 0019827 | biological_process | stem cell population maintenance |
| U | 0031124 | biological_process | mRNA 3'-end processing |
| U | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| U | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| U | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| U | 1990269 | molecular_function | RNA polymerase II C-terminal domain phosphoserine binding |
| V | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| V | 0000993 | molecular_function | RNA polymerase II complex binding |
| V | 0001650 | cellular_component | fibrillar center |
| V | 0001711 | biological_process | endodermal cell fate commitment |
| V | 0003682 | molecular_function | chromatin binding |
| V | 0005515 | molecular_function | protein binding |
| V | 0005634 | cellular_component | nucleus |
| V | 0005654 | cellular_component | nucleoplasm |
| V | 0005737 | cellular_component | cytoplasm |
| V | 0006351 | biological_process | DNA-templated transcription |
| V | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| V | 0016020 | cellular_component | membrane |
| V | 0016055 | biological_process | Wnt signaling pathway |
| V | 0016593 | cellular_component | Cdc73/Paf1 complex |
| V | 0019827 | biological_process | stem cell population maintenance |
| V | 0031124 | biological_process | mRNA 3'-end processing |
| V | 0034504 | biological_process | protein localization to nucleus |
| V | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| V | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| V | 0071222 | biological_process | cellular response to lipopolysaccharide |
| V | 1902808 | biological_process | positive regulation of cell cycle G1/S phase transition |
| W | 0000791 | cellular_component | euchromatin |
| W | 0000956 | biological_process | nuclear-transcribed mRNA catabolic process |
| W | 0005515 | molecular_function | protein binding |
| W | 0005634 | cellular_component | nucleus |
| W | 0005654 | cellular_component | nucleoplasm |
| W | 0005737 | cellular_component | cytoplasm |
| W | 0005829 | cellular_component | cytosol |
| W | 0006351 | biological_process | DNA-templated transcription |
| W | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| W | 0016055 | biological_process | Wnt signaling pathway |
| W | 0016593 | cellular_component | Cdc73/Paf1 complex |
| W | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| W | 0055087 | cellular_component | Ski complex |
| W | 0070478 | biological_process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay |
| W | 0072344 | biological_process | rescue of stalled ribosome |
| X | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| X | 0000781 | cellular_component | chromosome, telomeric region |
| X | 0000993 | molecular_function | RNA polymerase II complex binding |
| X | 0001711 | biological_process | endodermal cell fate commitment |
| X | 0005515 | molecular_function | protein binding |
| X | 0005634 | cellular_component | nucleus |
| X | 0005654 | cellular_component | nucleoplasm |
| X | 0006351 | biological_process | DNA-templated transcription |
| X | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| X | 0008285 | biological_process | negative regulation of cell population proliferation |
| X | 0016055 | biological_process | Wnt signaling pathway |
| X | 0016593 | cellular_component | Cdc73/Paf1 complex |
| X | 0019827 | biological_process | stem cell population maintenance |
| X | 0030177 | biological_process | positive regulation of Wnt signaling pathway |
| X | 0031124 | biological_process | mRNA 3'-end processing |
| X | 0031442 | biological_process | positive regulation of mRNA 3'-end processing |
| X | 0031648 | biological_process | protein destabilization |
| X | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| X | 0045638 | biological_process | negative regulation of myeloid cell differentiation |
| X | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| X | 0048147 | biological_process | negative regulation of fibroblast proliferation |
| X | 0050680 | biological_process | negative regulation of epithelial cell proliferation |
| X | 0071222 | biological_process | cellular response to lipopolysaccharide |
| X | 1902808 | biological_process | positive regulation of cell cycle G1/S phase transition |
| X | 2000134 | biological_process | negative regulation of G1/S transition of mitotic cell cycle |
| Y | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Y | 0000993 | molecular_function | RNA polymerase II complex binding |
| Y | 0005634 | cellular_component | nucleus |
| Y | 0006351 | biological_process | DNA-templated transcription |
| Y | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Y | 0008270 | molecular_function | zinc ion binding |
| Y | 0032044 | cellular_component | DSIF complex |
| Y | 0032785 | biological_process | negative regulation of DNA-templated transcription, elongation |
| Y | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| Y | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| Y | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Y | 0046872 | molecular_function | metal ion binding |
| Y | 0046982 | molecular_function | protein heterodimerization activity |
| Y | 0140870 | molecular_function | RNA polymerase inhibitor activity |
| Y | 0160239 | biological_process | transcription pausing by RNA polymerase II |
| Z | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| Z | 0003723 | molecular_function | RNA binding |
| Z | 0003729 | molecular_function | mRNA binding |
| Z | 0005515 | molecular_function | protein binding |
| Z | 0005634 | cellular_component | nucleus |
| Z | 0005654 | cellular_component | nucleoplasm |
| Z | 0006351 | biological_process | DNA-templated transcription |
| Z | 0006368 | biological_process | transcription elongation by RNA polymerase II |
| Z | 0016239 | biological_process | positive regulation of macroautophagy |
| Z | 0019899 | molecular_function | enzyme binding |
| Z | 0032044 | cellular_component | DSIF complex |
| Z | 0032785 | biological_process | negative regulation of DNA-templated transcription, elongation |
| Z | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| Z | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
| Z | 0034243 | biological_process | regulation of transcription elongation by RNA polymerase II |
| Z | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
| Z | 0046982 | molecular_function | protein heterodimerization activity |
| Z | 0140870 | molecular_function | RNA polymerase inhibitor activity |
| Z | 0160239 | biological_process | transcription pausing by RNA polymerase II |
| a | 0000786 | cellular_component | nucleosome |
| a | 0003677 | molecular_function | DNA binding |
| a | 0005515 | molecular_function | protein binding |
| a | 0005576 | cellular_component | extracellular region |
| a | 0005634 | cellular_component | nucleus |
| a | 0005654 | cellular_component | nucleoplasm |
| a | 0005694 | cellular_component | chromosome |
| a | 0006325 | biological_process | chromatin organization |
| a | 0006334 | biological_process | nucleosome assembly |
| a | 0030527 | molecular_function | structural constituent of chromatin |
| a | 0031492 | molecular_function | nucleosomal DNA binding |
| a | 0031507 | biological_process | heterochromatin formation |
| a | 0070062 | cellular_component | extracellular exosome |
| b | 0000781 | cellular_component | chromosome, telomeric region |
| b | 0000786 | cellular_component | nucleosome |
| b | 0003677 | molecular_function | DNA binding |
| b | 0003723 | molecular_function | RNA binding |
| b | 0005515 | molecular_function | protein binding |
| b | 0005576 | cellular_component | extracellular region |
| b | 0005634 | cellular_component | nucleus |
| b | 0005654 | cellular_component | nucleoplasm |
| b | 0005694 | cellular_component | chromosome |
| b | 0006325 | biological_process | chromatin organization |
| b | 0006334 | biological_process | nucleosome assembly |
| b | 0016020 | cellular_component | membrane |
| b | 0030527 | molecular_function | structural constituent of chromatin |
| b | 0032200 | biological_process | telomere organization |
| b | 0032991 | cellular_component | protein-containing complex |
| b | 0045653 | biological_process | negative regulation of megakaryocyte differentiation |
| b | 0061644 | biological_process | protein localization to CENP-A containing chromatin |
| b | 0070062 | cellular_component | extracellular exosome |
| e | 0000786 | cellular_component | nucleosome |
| e | 0003677 | molecular_function | DNA binding |
| e | 0005515 | molecular_function | protein binding |
| e | 0005576 | cellular_component | extracellular region |
| e | 0005634 | cellular_component | nucleus |
| e | 0005654 | cellular_component | nucleoplasm |
| e | 0005694 | cellular_component | chromosome |
| e | 0006325 | biological_process | chromatin organization |
| e | 0006334 | biological_process | nucleosome assembly |
| e | 0030527 | molecular_function | structural constituent of chromatin |
| e | 0031492 | molecular_function | nucleosomal DNA binding |
| e | 0031507 | biological_process | heterochromatin formation |
| e | 0070062 | cellular_component | extracellular exosome |
| f | 0000781 | cellular_component | chromosome, telomeric region |
| f | 0000786 | cellular_component | nucleosome |
| f | 0003677 | molecular_function | DNA binding |
| f | 0003723 | molecular_function | RNA binding |
| f | 0005515 | molecular_function | protein binding |
| f | 0005576 | cellular_component | extracellular region |
| f | 0005634 | cellular_component | nucleus |
| f | 0005654 | cellular_component | nucleoplasm |
| f | 0005694 | cellular_component | chromosome |
| f | 0006325 | biological_process | chromatin organization |
| f | 0006334 | biological_process | nucleosome assembly |
| f | 0016020 | cellular_component | membrane |
| f | 0030527 | molecular_function | structural constituent of chromatin |
| f | 0032200 | biological_process | telomere organization |
| f | 0032991 | cellular_component | protein-containing complex |
| f | 0045653 | biological_process | negative regulation of megakaryocyte differentiation |
| f | 0061644 | biological_process | protein localization to CENP-A containing chromatin |
| f | 0070062 | cellular_component | extracellular exosome |
| g | 0000786 | cellular_component | nucleosome |
| g | 0003677 | molecular_function | DNA binding |
| g | 0005515 | molecular_function | protein binding |
| g | 0005634 | cellular_component | nucleus |
| g | 0005654 | cellular_component | nucleoplasm |
| g | 0005694 | cellular_component | chromosome |
| g | 0006325 | biological_process | chromatin organization |
| g | 0008285 | biological_process | negative regulation of cell population proliferation |
| g | 0030527 | molecular_function | structural constituent of chromatin |
| g | 0031507 | biological_process | heterochromatin formation |
| g | 0061644 | biological_process | protein localization to CENP-A containing chromatin |
| g | 0070062 | cellular_component | extracellular exosome |
| h | 0000786 | cellular_component | nucleosome |
| h | 0002227 | biological_process | innate immune response in mucosa |
| h | 0003677 | molecular_function | DNA binding |
| h | 0005515 | molecular_function | protein binding |
| h | 0005615 | cellular_component | extracellular space |
| h | 0005634 | cellular_component | nucleus |
| h | 0005654 | cellular_component | nucleoplasm |
| h | 0005694 | cellular_component | chromosome |
| h | 0006325 | biological_process | chromatin organization |
| h | 0019731 | biological_process | antibacterial humoral response |
| h | 0030527 | molecular_function | structural constituent of chromatin |
| h | 0031640 | biological_process | killing of cells of another organism |
| h | 0042742 | biological_process | defense response to bacterium |
| h | 0050829 | biological_process | defense response to Gram-negative bacterium |
| h | 0050830 | biological_process | defense response to Gram-positive bacterium |
| h | 0061844 | biological_process | antimicrobial humoral immune response mediated by antimicrobial peptide |
| j | 0003723 | molecular_function | RNA binding |
| j | 0005634 | cellular_component | nucleus |
| j | 0005654 | cellular_component | nucleoplasm |
| j | 0005694 | cellular_component | chromosome |
| j | 0006260 | biological_process | DNA replication |
| j | 0006281 | biological_process | DNA repair |
| j | 0006334 | biological_process | nucleosome assembly |
| j | 0006337 | biological_process | nucleosome disassembly |
| j | 0006351 | biological_process | DNA-templated transcription |
| j | 0006366 | biological_process | transcription by RNA polymerase II |
| j | 0006974 | biological_process | DNA damage response |
| j | 0008023 | cellular_component | transcription elongation factor complex |
| j | 0031491 | molecular_function | nucleosome binding |
| j | 0032784 | biological_process | regulation of DNA-templated transcription elongation |
| j | 0032786 | biological_process | positive regulation of DNA-templated transcription, elongation |
| j | 0035101 | cellular_component | FACT complex |
| k | 0003677 | molecular_function | DNA binding |
| k | 0003682 | molecular_function | chromatin binding |
| k | 0003723 | molecular_function | RNA binding |
| k | 0005515 | molecular_function | protein binding |
| k | 0005634 | cellular_component | nucleus |
| k | 0005654 | cellular_component | nucleoplasm |
| k | 0005694 | cellular_component | chromosome |
| k | 0005730 | cellular_component | nucleolus |
| k | 0006260 | biological_process | DNA replication |
| k | 0006281 | biological_process | DNA repair |
| k | 0006334 | biological_process | nucleosome assembly |
| k | 0006337 | biological_process | nucleosome disassembly |
| k | 0006351 | biological_process | DNA-templated transcription |
| k | 0006974 | biological_process | DNA damage response |
| k | 0031491 | molecular_function | nucleosome binding |
| k | 0035101 | cellular_component | FACT complex |
| k | 0042393 | molecular_function | histone binding |
| k | 1902275 | biological_process | regulation of chromatin organization |
Functional Information from PROSITE/UniProt
| site_id | PS00018 |
| Number of Residues | 13 |
| Details | EF_HAND_1 EF-hand calcium-binding domain. DNDPSDYVEqdDI |
| Chain | Residue | Details |
| C | ASP136-ILE148 |
| site_id | PS00046 |
| Number of Residues | 7 |
| Details | HISTONE_H2A Histone H2A signature. AGLqFPV |
| Chain | Residue | Details |
| g | ALA22-VAL28 |
| site_id | PS00047 |
| Number of Residues | 5 |
| Details | HISTONE_H4 Histone H4 signature. GAKRH |
| Chain | Residue | Details |
| b | GLY15-HIS19 |
| site_id | PS00115 |
| Number of Residues | 7 |
| Details | RNA_POL_II_REPEAT Eukaryotic RNA polymerase II heptapeptide repeat. YSPTSPA |
| Chain | Residue | Details |
| A | TYR1593-ALA1599 | |
| A | TYR1671-SER1677 | |
| A | TYR1678-SER1684 | |
| A | TYR1685-SER1691 | |
| A | TYR1692-SER1698 | |
| A | TYR1699-SER1705 | |
| A | TYR1706-SER1712 | |
| A | TYR1713-SER1719 | |
| A | TYR1720-SER1726 | |
| A | TYR1727-SER1733 | |
| A | TYR1734-SER1740 | |
| A | TYR1615-SER1621 | |
| A | TYR1741-ASN1747 | |
| A | TYR1748-ASN1754 | |
| A | TYR1755-SER1761 | |
| A | TYR1762-SER1768 | |
| A | TYR1769-ASN1775 | |
| A | TYR1776-ASN1782 | |
| A | TYR1783-SER1789 | |
| A | TYR1790-SER1796 | |
| A | TYR1797-SER1803 | |
| A | TYR1818-SER1824 | |
| A | TYR1622-SER1628 | |
| A | TYR1825-SER1831 | |
| A | TYR1832-LYS1838 | |
| A | TYR1839-SER1845 | |
| A | TYR1853-LYS1859 | |
| A | TYR1860-LYS1866 | |
| A | TYR1867-LYS1873 | |
| A | TYR1874-THR1880 | |
| A | TYR1888-THR1894 | |
| A | TYR1902-LYS1908 | |
| A | TYR1909-THR1915 | |
| A | TYR1629-ASN1635 | |
| A | TYR1916-LYS1922 | |
| A | TYR1923-THR1929 | |
| A | TYR1930-LYS1936 | |
| A | TYR1947-THR1953 | |
| A | TYR1636-SER1642 | |
| A | TYR1643-SER1649 | |
| A | TYR1650-SER1656 | |
| A | TYR1657-SER1663 | |
| A | TYR1664-SER1670 |
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YVCTAPH |
| Chain | Residue | Details |
| I | TYR112-HIS118 |
| site_id | PS00322 |
| Number of Residues | 7 |
| Details | HISTONE_H3_1 Histone H3 signature 1. KAPRKQL |
| Chain | Residue | Details |
| a | LYS15-LEU21 |
| site_id | PS00357 |
| Number of Residues | 23 |
| Details | HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG |
| Chain | Residue | Details |
| h | ARG93-GLY115 |
| site_id | PS00446 |
| Number of Residues | 41 |
| Details | RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSIRRvfiaevpiiAidwVqidaNsSvlhDEfIAhRLGLIP |
| Chain | Residue | Details |
| C | ASN32-PRO72 |
| site_id | PS00466 |
| Number of Residues | 36 |
| Details | ZF_TFIIS_1 Zinc finger TFIIS-type signature. CgkCkkknctytqVQTRSaDEPmttfvvCne...CgnrW |
| Chain | Residue | Details |
| S | CYS263-TRP298 | |
| I | CYS86-TRP123 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. AASSslDaHIRLWDL |
| Chain | Residue | Details |
| W | ALA79-LEU93 |
| site_id | PS00959 |
| Number of Residues | 9 |
| Details | HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI |
| Chain | Residue | Details |
| a | PRO67-ILE75 |
| site_id | PS01030 |
| Number of Residues | 27 |
| Details | RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCQECNNMLypkedkenrillyaCrnC |
| Chain | Residue | Details |
| I | PHE16-CYS42 |
| site_id | PS01110 |
| Number of Residues | 14 |
| Details | RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPEHvvMtkEE |
| Chain | Residue | Details |
| E | HIS142-GLU155 |
| site_id | PS01111 |
| Number of Residues | 15 |
| Details | RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARvLGtRAlQ |
| Chain | Residue | Details |
| F | THR58-GLN72 |
| site_id | PS01112 |
| Number of Residues | 10 |
| Details | RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IIPVrCFTCG |
| Chain | Residue | Details |
| J | ILE2-GLY11 |
| site_id | PS01154 |
| Number of Residues | 32 |
| Details | RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. InkEdHTLgNiIksqLlkdpqVlfagYkvpHP |
| Chain | Residue | Details |
| K | ILE35-PRO66 |
| site_id | PS01159 |
| Number of Residues | 26 |
| Details | WW_DOMAIN_1 WW/rsp5/WWP domain signature. WktardpegkiyYYhvitrq.TQWDPP |
| Chain | Residue | Details |
| O | TRP2395-PRO2420 |
| site_id | PS01166 |
| Number of Residues | 13 |
| Details | RNA_POL_BETA RNA polymerases beta chain signature. GdKFASrHGQKGT |
| Chain | Residue | Details |
| B | GLY932-THR944 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI9 |
| Number of Residues | 45 |
| Details | Zinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 42 |
| Details | Zinc finger: {"description":"TFIIS-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10145","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00472","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 6 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 34 |
| Details | Repeat: {"description":"TPR 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI16 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI17 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI18 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI19 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI20 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI21 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI22 |
| Number of Residues | 32 |
| Details | Repeat: {"description":"TPR 8"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI23 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 9"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI24 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 10"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI25 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 11"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI26 |
| Number of Residues | 32 |
| Details | Repeat: {"description":"TPR 12"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI27 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 13"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI28 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 14"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI29 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 15"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI30 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"TPR 16"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI31 |
| Number of Residues | 43 |
| Details | Repeat: {"description":"WD 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI32 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI33 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI34 |
| Number of Residues | 41 |
| Details | Repeat: {"description":"WD 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI35 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI36 |
| Number of Residues | 39 |
| Details | Repeat: {"description":"WD 6"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI37 |
| Number of Residues | 33 |
| Details | Repeat: {"description":"WD 7"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI38 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylmethionine","evidences":[{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI39 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylthreonine; in WD repeat-containing protein 61, N-terminally processed","evidences":[{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI40 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI41 |
| Number of Residues | 38 |
| Details | Region: {"description":"Interaction with SUPT5H","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI42 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P63272","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI43 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P63272","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI44 |
| Number of Residues | 33 |
| Details | Domain: {"description":"KOW 1"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI45 |
| Number of Residues | 31 |
| Details | Domain: {"description":"KOW 2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI46 |
| Number of Residues | 31 |
| Details | Domain: {"description":"KOW 3"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI47 |
| Number of Residues | 33 |
| Details | Domain: {"description":"KOW 4"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI48 |
| Number of Residues | 33 |
| Details | Domain: {"description":"KOW 5"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI49 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"28892040","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5OIK","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI50 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI51 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"O55201","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI52 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19783980","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI53 |
| Number of Residues | 11 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI54 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI55 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI56 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29211711","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI57 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI58 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI59 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI60 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"PubMed","id":"31542297","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI61 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27436229","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI62 |
| Number of Residues | 2 |
| Details | Lipidation: {"description":"S-palmitoyl cysteine","evidences":[{"source":"PubMed","id":"21076176","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI63 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"PubMed","id":"17267393","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI64 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"PubMed","id":"21724829","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI65 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI66 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI67 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI68 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI69 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"PubMed","id":"30886146","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI70 |
| Number of Residues | 4 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"19818714","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI71 |
| Number of Residues | 5 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI72 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-crotonyllysine; alternate","evidences":[{"source":"PubMed","id":"21925322","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI73 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI74 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"24352239","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI75 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI76 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"PolyADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI77 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"UniProtKB","id":"Q8CGP1","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI78 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-lactoyllysine; alternate","evidences":[{"source":"PubMed","id":"31645732","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI79 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI80 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI81 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Dimethylated arginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI82 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI83 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q00729","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI84 |
| Number of Residues | 1 |
| Details | Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI85 |
| Number of Residues | 1 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"21726816","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI86 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"16307923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16713563","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI87 |
| Number of Residues | 15 |
| Details | Compositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI88 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI89 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI90 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI91 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI92 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI93 |
| Number of Residues | 5 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI94 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"25218447","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"25772364","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI95 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAR-2008","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V.","Vousden K.H.","Lukashchuk N."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI96 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |






