Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9QWZ

Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (BP focused refinement)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
B0004842molecular_functionubiquitin-protein transferase activity
B0005515molecular_functionprotein binding
B0005516molecular_functioncalmodulin binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005768cellular_componentendosome
B0005829cellular_componentcytosol
B0005856cellular_componentcytoskeleton
B0005886cellular_componentplasma membrane
B0006511biological_processubiquitin-dependent protein catabolic process
B0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
B0006979biological_processresponse to oxidative stress
B0007032biological_processendosome organization
B0008270molecular_functionzinc ion binding
B0010508biological_processpositive regulation of autophagy
B0016020cellular_componentmembrane
B0016567biological_processprotein ubiquitination
B0016740molecular_functiontransferase activity
B0030163biological_processprotein catabolic process
B0035579cellular_componentspecific granule membrane
B0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
B0044314biological_processprotein K27-linked ubiquitination
B0045717biological_processnegative regulation of fatty acid biosynthetic process
B0046872molecular_functionmetal ion binding
B0050821biological_processprotein stabilization
B0061630molecular_functionubiquitin protein ligase activity
B0070821cellular_componenttertiary granule membrane
B0070936biological_processprotein K48-linked ubiquitination
B0070979biological_processprotein K11-linked ubiquitination
B0071596biological_processubiquitin-dependent protein catabolic process via the N-end rule pathway
B0071629biological_processcytoplasm protein quality control by the ubiquitin-proteasome system
B0101003cellular_componentficolin-1-rich granule membrane
B0140455biological_processcytoplasm protein quality control
B0141191biological_processnegative regulation of HRI-mediated signaling
B0141198biological_processprotein branched polyubiquitination
B1990756molecular_functionubiquitin-like ligase-substrate adaptor activity
D0005576cellular_componentextracellular region
D0005737cellular_componentcytoplasm
D0005764cellular_componentlysosome
D0005770cellular_componentlate endosome
D0005829cellular_componentcytosol
D0005886cellular_componentplasma membrane
D0006511biological_processubiquitin-dependent protein catabolic process
D0006979biological_processresponse to oxidative stress
D0008270molecular_functionzinc ion binding
D0016740molecular_functiontransferase activity
D0043161biological_processproteasome-mediated ubiquitin-dependent protein catabolic process
D0045202cellular_componentsynapse
D0046872molecular_functionmetal ion binding
D0061630molecular_functionubiquitin protein ligase activity
D0070534biological_processprotein K63-linked ubiquitination
D0070936biological_processprotein K48-linked ubiquitination
D0099536biological_processsynaptic signaling
D0141191biological_processnegative regulation of HRI-mediated signaling
D1904813cellular_componentficolin-1-rich granule lumen
Functional Information from PROSITE/UniProt
site_idPS00028
Number of Residues23
DetailsZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cnkl.CtftItqkefmnqHwyhc.H
ChainResidueDetails
BCYS1658-HIS1680

site_idPS00923
Number of Residues10
DetailsASP_GLU_RACEMASE_1 Aspartate and glutamate racemases signature 1. AVqClNTSSK
ChainResidueDetails
BALA2551-LYS2560

site_idPS01357
Number of Residues28
DetailsZF_ZZ_1 Zinc finger ZZ-type signature. CdaClkgnfrgrRYkCli...CyDYdLCasC
ChainResidueDetails
DCYS9-CYS36

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

244693

PDB entries from 2025-11-12

PDB statisticsPDBj update infoContact PDBjnumon