9QVN
Cryo-EM reconstruction of the NEDD1 anchor protein bound to the gamma-tubulin ring complex
This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
| site_id | PS00227 |
| Number of Residues | 7 |
| Details | TUBULIN Tubulin subunits alpha, beta, and gamma signature. AGGTGSG |
| Chain | Residue | Details |
| d | ALA142-GLY148 |
| site_id | PS00406 |
| Number of Residues | 11 |
| Details | ACTINS_1 Actins signature 1. YVGDEAQs.KRG |
| Chain | Residue | Details |
| Z | TYR53-GLY63 |
| site_id | PS00432 |
| Number of Residues | 9 |
| Details | ACTINS_2 Actins signature 2. WISKqEYDE |
| Chain | Residue | Details |
| Z | TRP356-GLU364 |
| site_id | PS00678 |
| Number of Residues | 15 |
| Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSGglNnTVNIWDL |
| Chain | Residue | Details |
| V | LEU92-LEU106 | |
| V | LEU178-VAL192 |
| site_id | PS01132 |
| Number of Residues | 13 |
| Details | ACTINS_ACT_LIKE Actins and actin-related proteins signature. LLTEApLNPkaNR |
| Chain | Residue | Details |
| Z | LEU104-ARG116 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 5 |
| Details | MOD_RES: Phosphotyrosine => ECO:0007744|PubMed:15592455 |
| Chain | Residue | Details |
| G | TYR83 | |
| k | ALA142 | |
| l | ALA142 | |
| m | ALA142 | |
| n | ALA142 | |
| d | ALA142 | |
| M | TYR83 | |
| C | TYR83 | |
| A | TYR83 | |
| E | TYR83 | |
| g | ALA142 | |
| h | ALA142 | |
| i | ALA142 | |
| j | ALA142 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 14 |
| Details | MOD_RES: Phosphoserine; by BRSK1 => ECO:0000250|UniProtKB:P83887 |
| Chain | Residue | Details |
| a | SER131 | |
| k | SER131 | |
| l | SER131 | |
| m | SER131 | |
| n | SER131 | |
| d | SER131 | |
| b | SER131 | |
| c | SER131 | |
| e | SER131 | |
| f | SER131 | |
| g | SER131 | |
| h | SER131 | |
| i | SER131 | |
| j | SER131 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | MOD_RES: Methionine (R)-sulfoxide => ECO:0000269|PubMed:29343822 |
| Chain | Residue | Details |
| Z | MET44 | |
| Z | MET47 | |
| V | SER397 | |
| Y | SER397 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | MOD_RES: Tele-methylhistidine => ECO:0000269|PubMed:30526847, ECO:0000269|PubMed:30626964, ECO:0000269|PubMed:30785395, ECO:0000269|PubMed:31388018, ECO:0000269|PubMed:32503840 |
| Chain | Residue | Details |
| Z | HIS73 | |
| X | SER411 | |
| V | SER411 | |
| Y | SER411 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | MOD_RES: N6-methyllysine => ECO:0000269|PubMed:23673617 |
| Chain | Residue | Details |
| Z | LYS84 | |
| W | SER637 | |
| X | SER426 | |
| X | SER637 | |
| V | SER426 | |
| V | SER637 | |
| Y | SER426 | |
| Y | SER637 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | CROSSLNK: (Microbial infection) Isoglutamyl lysine isopeptide (Lys-Glu) (interchain with E-270); by Vibrio toxins RtxA and VgrG1 => ECO:0000305|PubMed:19015515 |
| Chain | Residue | Details |
| Z | LYS50 | |
| X | SER516 | |
| V | SER516 | |
| Y | SER516 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | CROSSLNK: (Microbial infection) Isoglutamyl lysine isopeptide (Glu-Lys) (interchain with K-50); by Vibrio toxins RtxA and VgrG1 => ECO:0000305|PubMed:19015515 |
| Chain | Residue | Details |
| W | THR550 | |
| Z | GLU270 | |
| V | THR550 | |
| Y | THR550 |
