9QH0
Escherichia coli polynucleotide phosphorylase in complex with recognition site of RNase E
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0004654 | molecular_function | polyribonucleotide nucleotidyltransferase activity |
| A | 0006396 | biological_process | RNA processing |
| A | 0006402 | biological_process | mRNA catabolic process |
| B | 0003723 | molecular_function | RNA binding |
| B | 0004654 | molecular_function | polyribonucleotide nucleotidyltransferase activity |
| B | 0006396 | biological_process | RNA processing |
| B | 0006402 | biological_process | mRNA catabolic process |
| C | 0003723 | molecular_function | RNA binding |
| C | 0004654 | molecular_function | polyribonucleotide nucleotidyltransferase activity |
| C | 0006396 | biological_process | RNA processing |
| C | 0006402 | biological_process | mRNA catabolic process |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 9 |
| Details | Region: {"description":"FFRR loop; important for RNA binding","evidences":[{"source":"PubMed","id":"19327365","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 12 |
| Details | Region: {"description":"Interaction with RNase E","evidences":[{"source":"PubMed","id":"19327365","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"19327365","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 12 |
| Details | Compositional bias: {"description":"Low complexity","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
