9PGD
ARP6-ZNHIT1 module from fully-engaged state of SRCAP-nucleosome complex, with H3-bound ARP6 (focused refinement, filtered by local resolution)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| C | 0000786 | cellular_component | nucleosome |
| C | 0000812 | cellular_component | Swr1 complex |
| C | 0005515 | molecular_function | protein binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005730 | cellular_component | nucleolus |
| C | 0005856 | cellular_component | cytoskeleton |
| C | 0006338 | biological_process | chromatin remodeling |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0007000 | biological_process | nucleolus organization |
| C | 0016479 | biological_process | negative regulation of transcription by RNA polymerase I |
| C | 0031491 | molecular_function | nucleosome binding |
| C | 0045943 | biological_process | positive regulation of transcription by RNA polymerase I |
| D | 0000786 | cellular_component | nucleosome |
| D | 0000812 | cellular_component | Swr1 complex |
| D | 0003015 | biological_process | heart process |
| D | 0003682 | molecular_function | chromatin binding |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0006338 | biological_process | chromatin remodeling |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0031491 | molecular_function | nucleosome binding |
| D | 0036335 | biological_process | intestinal stem cell homeostasis |
| D | 0042393 | molecular_function | histone binding |
| D | 0042692 | biological_process | muscle cell differentiation |
| D | 0042826 | molecular_function | histone deacetylase binding |
| D | 0043517 | biological_process | positive regulation of DNA damage response, signal transduction by p53 class mediator |
| D | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
| D | 0055074 | biological_process | calcium ion homeostasis |
| D | 0060261 | biological_process | positive regulation of transcription initiation by RNA polymerase II |
| D | 0061484 | biological_process | hematopoietic stem cell homeostasis |
| D | 1905458 | biological_process | positive regulation of lymphoid progenitor cell differentiation |
| U | 0000786 | cellular_component | nucleosome |
| U | 0005515 | molecular_function | protein binding |
| U | 0005634 | cellular_component | nucleus |
| U | 0005654 | cellular_component | nucleoplasm |
| U | 0005694 | cellular_component | chromosome |
| U | 0006334 | biological_process | nucleosome assembly |
| U | 0030527 | molecular_function | structural constituent of chromatin |
| U | 0031507 | biological_process | heterochromatin formation |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylthreonine","evidences":[{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 32 |
| Details | Zinc finger: {"description":"HIT-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00453","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 16 |
| Details | Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 9 |
| Details | Motif: {"description":"Nuclear localization signal","evidences":[{"source":"PubMed","id":"17892483","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00453","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine; by MAPK11 and MAPK14","evidences":[{"source":"PubMed","id":"17380123","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P68431","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
