9OYL
Structure of the E. coli clamp loader DnaX-complex loading beta-clamp onto 10-nt gapped DNA in state 2 conformer 4 with fully closed clamp
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003689 | molecular_function | DNA clamp loader activity |
| A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0006260 | biological_process | DNA replication |
| A | 0006261 | biological_process | DNA-templated DNA replication |
| A | 0009360 | cellular_component | DNA polymerase III complex |
| A | 0030894 | cellular_component | replisome |
| A | 0034061 | molecular_function | DNA polymerase activity |
| A | 0043846 | cellular_component | DNA polymerase III, clamp loader complex |
| A | 0071897 | biological_process | DNA biosynthetic process |
| E | 0003689 | molecular_function | DNA clamp loader activity |
| E | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| E | 0005515 | molecular_function | protein binding |
| E | 0006260 | biological_process | DNA replication |
| E | 0006261 | biological_process | DNA-templated DNA replication |
| E | 0009360 | cellular_component | DNA polymerase III complex |
| E | 0030894 | cellular_component | replisome |
| E | 0034061 | molecular_function | DNA polymerase activity |
| E | 0043846 | cellular_component | DNA polymerase III, clamp loader complex |
| E | 0071897 | biological_process | DNA biosynthetic process |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
| F | 0042802 | molecular_function | identical protein binding |
| F | 0071897 | biological_process | DNA biosynthetic process |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
| G | 0042802 | molecular_function | identical protein binding |
| G | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 139 |
| Details | Region: {"description":"Domain 1","evidences":[{"source":"PubMed","id":"11525728","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 69 |
| Details | Region: {"description":"Domain 2","evidences":[{"source":"PubMed","id":"11525728","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 132 |
| Details | Region: {"description":"Domain 3","evidences":[{"source":"PubMed","id":"11525728","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 21 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"11525729","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1JR3","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 248 |
| Details | Region: {"description":"I","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 254 |
| Details | Region: {"description":"II","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 112 |
| Details | Region: {"description":"III","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
