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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9N37

Cryo-EM structure of Rubisco from Arabidopsis thaliana with the 1A small subunit isoform

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003729molecular_functionmRNA binding
A0005515molecular_functionprotein binding
A0009505cellular_componentplant-type cell wall
A0009507cellular_componentchloroplast
A0009535cellular_componentchloroplast thylakoid membrane
A0009536cellular_componentplastid
A0009570cellular_componentchloroplast stroma
A0009579cellular_componentthylakoid
A0009737biological_processresponse to abscisic acid
A0009941cellular_componentchloroplast envelope
A0015977biological_processcarbon fixation
A0016984molecular_functionribulose-bisphosphate carboxylase activity
A0019253biological_processreductive pentose-phosphate cycle
A0022626cellular_componentcytosolic ribosome
A0046686biological_processresponse to cadmium ion
A0048046cellular_componentapoplast
B0000287molecular_functionmagnesium ion binding
B0003729molecular_functionmRNA binding
B0005515molecular_functionprotein binding
B0009505cellular_componentplant-type cell wall
B0009507cellular_componentchloroplast
B0009535cellular_componentchloroplast thylakoid membrane
B0009536cellular_componentplastid
B0009570cellular_componentchloroplast stroma
B0009579cellular_componentthylakoid
B0009737biological_processresponse to abscisic acid
B0009941cellular_componentchloroplast envelope
B0015977biological_processcarbon fixation
B0016984molecular_functionribulose-bisphosphate carboxylase activity
B0019253biological_processreductive pentose-phosphate cycle
B0022626cellular_componentcytosolic ribosome
B0046686biological_processresponse to cadmium ion
B0048046cellular_componentapoplast
C0000287molecular_functionmagnesium ion binding
C0003729molecular_functionmRNA binding
C0005515molecular_functionprotein binding
C0009505cellular_componentplant-type cell wall
C0009507cellular_componentchloroplast
C0009535cellular_componentchloroplast thylakoid membrane
C0009536cellular_componentplastid
C0009570cellular_componentchloroplast stroma
C0009579cellular_componentthylakoid
C0009737biological_processresponse to abscisic acid
C0009941cellular_componentchloroplast envelope
C0015977biological_processcarbon fixation
C0016984molecular_functionribulose-bisphosphate carboxylase activity
C0019253biological_processreductive pentose-phosphate cycle
C0022626cellular_componentcytosolic ribosome
C0046686biological_processresponse to cadmium ion
C0048046cellular_componentapoplast
D0000287molecular_functionmagnesium ion binding
D0003729molecular_functionmRNA binding
D0005515molecular_functionprotein binding
D0009505cellular_componentplant-type cell wall
D0009507cellular_componentchloroplast
D0009535cellular_componentchloroplast thylakoid membrane
D0009536cellular_componentplastid
D0009570cellular_componentchloroplast stroma
D0009579cellular_componentthylakoid
D0009737biological_processresponse to abscisic acid
D0009941cellular_componentchloroplast envelope
D0015977biological_processcarbon fixation
D0016984molecular_functionribulose-bisphosphate carboxylase activity
D0019253biological_processreductive pentose-phosphate cycle
D0022626cellular_componentcytosolic ribosome
D0046686biological_processresponse to cadmium ion
D0048046cellular_componentapoplast
E0000287molecular_functionmagnesium ion binding
E0003729molecular_functionmRNA binding
E0005515molecular_functionprotein binding
E0009505cellular_componentplant-type cell wall
E0009507cellular_componentchloroplast
E0009535cellular_componentchloroplast thylakoid membrane
E0009536cellular_componentplastid
E0009570cellular_componentchloroplast stroma
E0009579cellular_componentthylakoid
E0009737biological_processresponse to abscisic acid
E0009941cellular_componentchloroplast envelope
E0015977biological_processcarbon fixation
E0016984molecular_functionribulose-bisphosphate carboxylase activity
E0019253biological_processreductive pentose-phosphate cycle
E0022626cellular_componentcytosolic ribosome
E0046686biological_processresponse to cadmium ion
E0048046cellular_componentapoplast
F0000287molecular_functionmagnesium ion binding
F0003729molecular_functionmRNA binding
F0005515molecular_functionprotein binding
F0009505cellular_componentplant-type cell wall
F0009507cellular_componentchloroplast
F0009535cellular_componentchloroplast thylakoid membrane
F0009536cellular_componentplastid
F0009570cellular_componentchloroplast stroma
F0009579cellular_componentthylakoid
F0009737biological_processresponse to abscisic acid
F0009941cellular_componentchloroplast envelope
F0015977biological_processcarbon fixation
F0016984molecular_functionribulose-bisphosphate carboxylase activity
F0019253biological_processreductive pentose-phosphate cycle
F0022626cellular_componentcytosolic ribosome
F0046686biological_processresponse to cadmium ion
F0048046cellular_componentapoplast
G0000287molecular_functionmagnesium ion binding
G0003729molecular_functionmRNA binding
G0005515molecular_functionprotein binding
G0009505cellular_componentplant-type cell wall
G0009507cellular_componentchloroplast
G0009535cellular_componentchloroplast thylakoid membrane
G0009536cellular_componentplastid
G0009570cellular_componentchloroplast stroma
G0009579cellular_componentthylakoid
G0009737biological_processresponse to abscisic acid
G0009941cellular_componentchloroplast envelope
G0015977biological_processcarbon fixation
G0016984molecular_functionribulose-bisphosphate carboxylase activity
G0019253biological_processreductive pentose-phosphate cycle
G0022626cellular_componentcytosolic ribosome
G0046686biological_processresponse to cadmium ion
G0048046cellular_componentapoplast
H0000287molecular_functionmagnesium ion binding
H0003729molecular_functionmRNA binding
H0005515molecular_functionprotein binding
H0009505cellular_componentplant-type cell wall
H0009507cellular_componentchloroplast
H0009535cellular_componentchloroplast thylakoid membrane
H0009536cellular_componentplastid
H0009570cellular_componentchloroplast stroma
H0009579cellular_componentthylakoid
H0009737biological_processresponse to abscisic acid
H0009941cellular_componentchloroplast envelope
H0015977biological_processcarbon fixation
H0016984molecular_functionribulose-bisphosphate carboxylase activity
H0019253biological_processreductive pentose-phosphate cycle
H0022626cellular_componentcytosolic ribosome
H0046686biological_processresponse to cadmium ion
H0048046cellular_componentapoplast
Functional Information from PROSITE/UniProt
site_idPS00157
Number of Residues9
DetailsRUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFtKdDE
ChainResidueDetails
AGLY196-GLU204
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"description":"in homodimeric partner","evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29372894","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IU0","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues64
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"29372894","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IU0","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues8
DetailsBinding site: {"description":"via carbamate group","evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29372894","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IU0","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29372894","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IU0","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues8
DetailsSite: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues8
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"HAMAP-Rule","id":"MF_01338","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29372894","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5IU0","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"22092075","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues8
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"19376835","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19376835","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

251801

PDB entries from 2026-04-08

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