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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9LJ2

Structure of isw1-nucleosome double-bound complex in ADP-ADP+ state

Functional Information from GO Data
ChainGOidnamespacecontents
K0000166molecular_functionnucleotide binding
K0000182molecular_functionrDNA binding
K0000785cellular_componentchromatin
K0000976molecular_functiontranscription cis-regulatory region binding
K0001178biological_processregulation of transcriptional start site selection at RNA polymerase II promoter
K0003677molecular_functionDNA binding
K0003682molecular_functionchromatin binding
K0003730molecular_functionmRNA 3'-UTR binding
K0004386molecular_functionhelicase activity
K0005515molecular_functionprotein binding
K0005524molecular_functionATP binding
K0005634cellular_componentnucleus
K0006325biological_processchromatin organization
K0006338biological_processchromatin remodeling
K0006354biological_processDNA-templated transcription elongation
K0006355biological_processregulation of DNA-templated transcription
K0006363biological_processtermination of RNA polymerase I transcription
K0006369biological_processtermination of RNA polymerase II transcription
K0007062biological_processsister chromatid cohesion
K0009408biological_processresponse to heat
K0016587cellular_componentIsw1 complex
K0016787molecular_functionhydrolase activity
K0016887molecular_functionATP hydrolysis activity
K0030874cellular_componentnucleolar chromatin
K0031491molecular_functionnucleosome binding
K0031507biological_processheterochromatin formation
K0036436cellular_componentIsw1a complex
K0036437cellular_componentIsw1b complex
K0045944biological_processpositive regulation of transcription by RNA polymerase II
K0046832biological_processnegative regulation of RNA export from nucleus
K0140750molecular_functionnucleosome array spacer activity
K1902275biological_processregulation of chromatin organization
K1903895biological_processnegative regulation of IRE1-mediated unfolded protein response
N0000166molecular_functionnucleotide binding
N0000182molecular_functionrDNA binding
N0000785cellular_componentchromatin
N0000976molecular_functiontranscription cis-regulatory region binding
N0001178biological_processregulation of transcriptional start site selection at RNA polymerase II promoter
N0003677molecular_functionDNA binding
N0003682molecular_functionchromatin binding
N0003730molecular_functionmRNA 3'-UTR binding
N0004386molecular_functionhelicase activity
N0005515molecular_functionprotein binding
N0005524molecular_functionATP binding
N0005634cellular_componentnucleus
N0006325biological_processchromatin organization
N0006338biological_processchromatin remodeling
N0006354biological_processDNA-templated transcription elongation
N0006355biological_processregulation of DNA-templated transcription
N0006363biological_processtermination of RNA polymerase I transcription
N0006369biological_processtermination of RNA polymerase II transcription
N0007062biological_processsister chromatid cohesion
N0009408biological_processresponse to heat
N0016587cellular_componentIsw1 complex
N0016787molecular_functionhydrolase activity
N0016887molecular_functionATP hydrolysis activity
N0030874cellular_componentnucleolar chromatin
N0031491molecular_functionnucleosome binding
N0031507biological_processheterochromatin formation
N0036436cellular_componentIsw1a complex
N0036437cellular_componentIsw1b complex
N0045944biological_processpositive regulation of transcription by RNA polymerase II
N0046832biological_processnegative regulation of RNA export from nucleus
N0140750molecular_functionnucleosome array spacer activity
N1902275biological_processregulation of chromatin organization
N1903895biological_processnegative regulation of IRE1-mediated unfolded protein response
Functional Information from PROSITE/UniProt
site_idPS00046
Number of Residues7
DetailsHISTONE_H2A Histone H2A signature. AGLqFPV
ChainResidueDetails
CALA21-VAL27
site_idPS00357
Number of Residues23
DetailsHISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
ChainResidueDetails
DARG89-GLY111
site_idPS00959
Number of Residues9
DetailsHISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
ChainResidueDetails
APRO66-ILE74
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsDNA binding: {}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues6
DetailsModified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues4
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues2
DetailsModified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues2
DetailsGlycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues4
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P0C1H4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues330
DetailsDomain: {"description":"Helicase ATP-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues6
DetailsMotif: {"description":"DEAH box"}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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