Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

9L96

State D of archaeal pre-50S ribosome

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006412	biological_process	translation
b	0003729	molecular_function	mRNA binding
b	0003735	molecular_function	structural constituent of ribosome
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0017148	biological_process	negative regulation of translation
b	0022625	cellular_component	cytosolic large ribosomal subunit
c	0003735	molecular_function	structural constituent of ribosome
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0019843	molecular_function	rRNA binding
d	0006412	biological_process	translation
e	0006412	biological_process	translation
e	0070180	molecular_function	large ribosomal subunit rRNA binding
E	0001682	biological_process	tRNA 5'-leader removal
E	0004526	molecular_function	ribonuclease P activity
E	0005737	cellular_component	cytoplasm
E	0006412	biological_process	translation
f	0003735	molecular_function	structural constituent of ribosome
f	0006412	biological_process	translation
f	0019843	molecular_function	rRNA binding
f	0022625	cellular_component	cytosolic large ribosomal subunit
f	0070180	molecular_function	large ribosomal subunit rRNA binding
F	0006412	biological_process	translation
G	0002181	biological_process	cytoplasmic translation
G	0003723	molecular_function	RNA binding
G	0003735	molecular_function	structural constituent of ribosome
G	0005737	cellular_component	cytoplasm
G	0006412	biological_process	translation
G	0019843	molecular_function	rRNA binding
G	0022625	cellular_component	cytosolic large ribosomal subunit
H	0003723	molecular_function	RNA binding
H	0003735	molecular_function	structural constituent of ribosome
H	0005737	cellular_component	cytoplasm
H	0006412	biological_process	translation
H	0022625	cellular_component	cytosolic large ribosomal subunit
I	0000027	biological_process	ribosomal large subunit assembly
I	0003735	molecular_function	structural constituent of ribosome
I	0006412	biological_process	translation
I	0008097	molecular_function	5S rRNA binding
I	0019843	molecular_function	rRNA binding
I	0022625	cellular_component	cytosolic large ribosomal subunit
J	0006412	biological_process	translation
J	0070180	molecular_function	large ribosomal subunit rRNA binding
K	0006412	biological_process	translation
L	0002181	biological_process	cytoplasmic translation
L	0003735	molecular_function	structural constituent of ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	0022625	cellular_component	cytosolic large ribosomal subunit
M	0006412	biological_process	translation
M	0019843	molecular_function	rRNA binding
N	0003735	molecular_function	structural constituent of ribosome
N	0006412	biological_process	translation
N	0015934	cellular_component	large ribosomal subunit
N	0019843	molecular_function	rRNA binding
O	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
O	0003723	molecular_function	RNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0006412	biological_process	translation
O	0022625	cellular_component	cytosolic large ribosomal subunit
P	0002181	biological_process	cytoplasmic translation
P	0003735	molecular_function	structural constituent of ribosome
P	0006412	biological_process	translation
P	0022625	cellular_component	cytosolic large ribosomal subunit
Q	0022625	cellular_component	cytosolic large ribosomal subunit
R	0006412	biological_process	translation
R	0070180	molecular_function	large ribosomal subunit rRNA binding
S	0003723	molecular_function	RNA binding
S	0006412	biological_process	translation
S	0008270	molecular_function	zinc ion binding
S	0022625	cellular_component	cytosolic large ribosomal subunit
T	0006412	biological_process	translation
T	0008270	molecular_function	zinc ion binding
T	0070180	molecular_function	large ribosomal subunit rRNA binding
U	0002181	biological_process	cytoplasmic translation
U	0003723	molecular_function	RNA binding
U	0003735	molecular_function	structural constituent of ribosome
U	0006412	biological_process	translation
U	0019843	molecular_function	rRNA binding
U	0022625	cellular_component	cytosolic large ribosomal subunit
V	0003723	molecular_function	RNA binding
V	0003735	molecular_function	structural constituent of ribosome
V	0006412	biological_process	translation
V	0019843	molecular_function	rRNA binding
V	0022625	cellular_component	cytosolic large ribosomal subunit
W	0006412	biological_process	translation
W	0019843	molecular_function	rRNA binding
X	0000049	molecular_function	tRNA binding
X	0006412	biological_process	translation
X	0019843	molecular_function	rRNA binding
Y	0002181	biological_process	cytoplasmic translation
Y	0003735	molecular_function	structural constituent of ribosome
Y	0006412	biological_process	translation
Y	0019843	molecular_function	rRNA binding
Y	0022625	cellular_component	cytosolic large ribosomal subunit

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrqrksirrp.DGtrvkFedNaaVI

Chain	Residue	Details
f	ALA71-ILE97

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKATVRLSedddaqeV

Chain	Residue	Details
c	LYS61-VAL76

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. KTdmeVsrNpkrRNWRR

Chain	Residue	Details
A	LYS29-ARG45

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNAvD

Chain	Residue	Details
U	PRO187-ASP198

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FrageylDaaGvTkGKGtqGpvkR

Chain	Residue	Details
V	PHE195-ARG218

site_id	PS00475
Number of Residues	31
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGsGvLqkn..VtVaavdFSstArtkIeqvG

Chain	Residue	Details
H	LYS64-GLY94

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRMaAdvldVGkgrVWFDP

Chain	Residue	Details
J	GLN7-PRO26

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. NPGRVSeLKKTIARI

Chain	Residue	Details
d	ASN43-ILE57

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FnRqdyhKkkRTpts..WRRprG

Chain	Residue	Details
Q	PHE122-GLY142

site_id	PS00591
Number of Residues	11
Details	GH10_1 Glycosyl hydrolases family 10 (GH10) active site. ASNVrVTELDL

Chain	Residue	Details
N	ALA94-LEU104

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. TLsmLnIhRvnHaTfvpendayrgMItkVndFV

Chain	Residue	Details
O	THR20-VAL52

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QltrVkdKdtRvFtDGVYItqK

Chain	Residue	Details
Y	GLN151-LYS172

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMLPykkprGRealsnVrVYvG

Chain	Residue	Details
b	ILE83-GLY106

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NtkeRklAVrSALaATTdselvaeRGH

Chain	Residue	Details
W	ASN103-HIS129

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. YsGeeIePGtGtmYvKtD

Chain	Residue	Details
M	TYR9-ASP26

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSqGkKnktt.HvkCrRCG

Chain	Residue	Details
S	GLY5-GLY24

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. DrLekPRrtHAeVNLgRI

Chain	Residue	Details
H	ASP32-ILE49

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVeVLrGdfAGee.GeV

Chain	Residue	Details
N	GLY46-VAL63

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GQkVhlnldpsvrd.GrfHprFnGlTG

Chain	Residue	Details
K	GLY37-GLY62

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KpTKKthLKyiC

Chain	Residue	Details
T	LYS61-CYS72

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKAReLGYkAkqGIVVVRvSVrKG

Chain	Residue	Details
G	ASP48-GLY71

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)