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9JVM

Cryo-EM structure of the receptor of xGPR4-apo in pH8.0

Functional Information from GO Data
ChainGOidnamespacecontents
R0004930molecular_functionG protein-coupled receptor activity
R0005886cellular_componentplasma membrane
R0007165biological_processsignal transduction
R0007186biological_processG protein-coupled receptor signaling pathway
R0007189biological_processadenylate cyclase-activating G protein-coupled receptor signaling pathway
R0010447biological_processresponse to acidic pH
R0016020cellular_componentmembrane
R0071468biological_processcellular response to acidic pH
Functional Information from PROSITE/UniProt
site_idPS00237
Number of Residues17
DetailsG_PROTEIN_RECEP_F1_1 G-protein coupled receptors family 1 signature. VGAaFLSCVSADRYLaV
ChainResidueDetails
RVAL103-VAL119

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. FgFVFYTNLYVG
ChainResidueDetails
RPHE93-GLY104

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues30
DetailsTransmembrane: {"description":"Helical; Name=2","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues35
DetailsTransmembrane: {"description":"Helical; Name=3","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues26
DetailsTransmembrane: {"description":"Helical; Name=4","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues28
DetailsTransmembrane: {"description":"Helical; Name=7","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsSite: {"description":"Required for activation","evidences":[{"source":"UniProtKB","id":"P46093","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues3
DetailsSite: {"description":"Proton sensing","evidences":[{"source":"PubMed","id":"39753131","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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