9JCE
local refinement of FEM1B bound with TOM20
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000151 | cellular_component | ubiquitin ligase complex |
A | 0002070 | biological_process | epithelial cell maturation |
A | 0005123 | molecular_function | death receptor binding |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005829 | cellular_component | cytosol |
A | 0006915 | biological_process | apoptotic process |
A | 0016567 | biological_process | protein ubiquitination |
A | 0031462 | cellular_component | Cul2-RING ubiquitin ligase complex |
A | 0043161 | biological_process | proteasome-mediated ubiquitin-dependent protein catabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051438 | biological_process | regulation of ubiquitin-protein transferase activity |
A | 0060442 | biological_process | branching involved in prostate gland morphogenesis |
A | 0060743 | biological_process | epithelial cell maturation involved in prostate gland development |
A | 0140627 | biological_process | ubiquitin-dependent protein catabolic process via the C-end degron rule pathway |
A | 1902041 | biological_process | regulation of extrinsic apoptotic signaling pathway via death domain receptors |
A | 1990756 | molecular_function | ubiquitin-like ligase-substrate adaptor activity |
A | 2000001 | biological_process | regulation of DNA damage checkpoint |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 120 |
Details | TOPO_DOM: Cytoplasmic => ECO:0000255 |
Chain | Residue | Details |
B | ASP25-GLU145 | |
A | CYS186 | |
A | HIS218 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569 |
Chain | Residue | Details |
B | SER135 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692 |
Chain | Residue | Details |
B | SER138 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:25621951 |
Chain | Residue | Details |
B | LYS35 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:24896179 |
Chain | Residue | Details |
B | LYS68 |
site_id | SWS_FT_FI6 |
Number of Residues | 2 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:24896179, ECO:0000269|PubMed:25621951 |
Chain | Residue | Details |
B | LYS56 | |
B | LYS61 |