9IS6

CryoEM structure of Plant-Complex-C-5b

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000338	biological_process	protein deneddylation
A	0005515	molecular_function	protein binding
A	0005634	cellular_component	nucleus
A	0005737	cellular_component	cytoplasm
A	0006972	biological_process	hyperosmotic response
A	0008180	cellular_component	COP9 signalosome
A	0009585	biological_process	red, far-red light phototransduction
A	0009640	biological_process	photomorphogenesis
A	0009646	biological_process	response to absence of light
A	0009651	biological_process	response to salt stress
A	0009793	biological_process	embryo development ending in seed dormancy
A	0010017	biological_process	red or far-red light signaling pathway
A	0065003	biological_process	protein-containing complex assembly
B	0000338	biological_process	protein deneddylation
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005737	cellular_component	cytoplasm
B	0008180	cellular_component	COP9 signalosome
B	0009585	biological_process	red, far-red light phototransduction
B	0009640	biological_process	photomorphogenesis
B	0010017	biological_process	red or far-red light signaling pathway
B	0030163	biological_process	protein catabolic process
C	0000338	biological_process	protein deneddylation
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005737	cellular_component	cytoplasm
C	0006511	biological_process	ubiquitin-dependent protein catabolic process
C	0008180	cellular_component	COP9 signalosome
C	0009585	biological_process	red, far-red light phototransduction
C	0009640	biological_process	photomorphogenesis
C	0010017	biological_process	red or far-red light signaling pathway
C	0010971	biological_process	positive regulation of G2/M transition of mitotic cell cycle
D	0000338	biological_process	protein deneddylation
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005737	cellular_component	cytoplasm
D	0008180	cellular_component	COP9 signalosome
D	0009585	biological_process	red, far-red light phototransduction
D	0009640	biological_process	photomorphogenesis
D	0010017	biological_process	red or far-red light signaling pathway
D	0010100	biological_process	negative regulation of photomorphogenesis
D	0010971	biological_process	positive regulation of G2/M transition of mitotic cell cycle
D	0032991	cellular_component	protein-containing complex
E	0000338	biological_process	protein deneddylation
E	0005515	molecular_function	protein binding
E	0005634	cellular_component	nucleus
E	0005737	cellular_component	cytoplasm
E	0006508	biological_process	proteolysis
E	0008180	cellular_component	COP9 signalosome
E	0008233	molecular_function	peptidase activity
E	0008237	molecular_function	metallopeptidase activity
E	0009585	biological_process	red, far-red light phototransduction
E	0009640	biological_process	photomorphogenesis
E	0009733	biological_process	response to auxin
E	0010017	biological_process	red or far-red light signaling pathway
E	0010100	biological_process	negative regulation of photomorphogenesis
E	0010387	biological_process	COP9 signalosome assembly
E	0010971	biological_process	positive regulation of G2/M transition of mitotic cell cycle
E	0016787	molecular_function	hydrolase activity
E	0019784	molecular_function	deNEDDylase activity
E	0045732	biological_process	positive regulation of protein catabolic process
E	0046872	molecular_function	metal ion binding
E	0051726	biological_process	regulation of cell cycle
E	0070647	biological_process	protein modification by small protein conjugation or removal
E	2000082	biological_process	regulation of L-ascorbic acid biosynthetic process
F	0000338	biological_process	protein deneddylation
F	0005515	molecular_function	protein binding
F	0005576	cellular_component	extracellular region
F	0005634	cellular_component	nucleus
F	0005737	cellular_component	cytoplasm
F	0008180	cellular_component	COP9 signalosome
F	0009585	biological_process	red, far-red light phototransduction
F	0010017	biological_process	red or far-red light signaling pathway
F	0010387	biological_process	COP9 signalosome assembly
G	0000338	biological_process	protein deneddylation
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005737	cellular_component	cytoplasm
G	0008180	cellular_component	COP9 signalosome
G	0009585	biological_process	red, far-red light phototransduction
G	0009640	biological_process	photomorphogenesis
G	0010017	biological_process	red or far-red light signaling pathway
G	0010387	biological_process	COP9 signalosome assembly
H	0000338	biological_process	protein deneddylation
H	0004222	molecular_function	metalloendopeptidase activity
H	0005515	molecular_function	protein binding
H	0005634	cellular_component	nucleus
H	0005737	cellular_component	cytoplasm
H	0008180	cellular_component	COP9 signalosome
H	0009416	biological_process	response to light stimulus
H	0009585	biological_process	red, far-red light phototransduction
H	0009640	biological_process	photomorphogenesis
H	0009753	biological_process	response to jasmonic acid
H	0010017	biological_process	red or far-red light signaling pathway
H	0010387	biological_process	COP9 signalosome assembly

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	665
Details	Domain: {"description":"PCI","evidences":[{"source":"PROSITE-ProRule","id":"PRU01185","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	137
Details	Domain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	13
Details	Motif: {"description":"JAMM motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---