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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9I88

Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin

This is a non-PDB format compatible entry.
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVIVrtksgvrrn.DGsyikFdeNacVI
ChainResidueDetails
NALA60-ILE86
site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SkLvtkLInkimldGKRgtaqrILysA
ChainResidueDetails
hSER20-ALA46
site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GiaLVSTSeGVItdkeAR
ChainResidueDetails
iGLY102-ARG119
site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqsA.GLeVtairDvTPvPHN
ChainResidueDetails
lILE97-ASN119
site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
mLYS56-ARG63
site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVkIqEtRPLS
ChainResidueDetails
rGLY58-SER70
site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.TelLkrFISEr.GKIlprRV
ChainResidueDetails
sILE26-VAL49
site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. DGRkhvpvyVtedmVGhkLGEFapT
ChainResidueDetails
tASP53-THR77
site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LelITGQkpLvTkAKkS
ChainResidueDetails
JLEU57-SER73
site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGftGQaqAirhGiARAL
ChainResidueDetails
jGLY71-LEU89
site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkrsGAdvsGPIpLPT
ChainResidueDetails
kALA29-THR44
site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VneHLrthKkDhhSrrgLlkMvgrrrhLlnY
ChainResidueDetails
pVAL39-TYR69
site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KrfRpRAqGRasainkrtSHITIvV
ChainResidueDetails
VLYS83-VAL107
site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGSVmNPnD
ChainResidueDetails
GPRO218-ASP229
site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FvagdviDvtGvSkGKGfqGaikR
ChainResidueDetails
HPHE110-ARG133
site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KILGnGsLdkk..LtVkahkFSasAaeaIdakG
ChainResidueDetails
OLYS110-GLY140
site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PEpYKGKGI
ChainResidueDetails
KPRO154-ILE162
site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CercgrphsvyrkFKLCRiCFR
ChainResidueDetails
oARG23-ARG45
site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. ARaeqyseGtVplHt..LradIDyahaeadTtyGklG
ChainResidueDetails
dALA162-GLY196
site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YiTtKNkrnnPerIEmkKYC
ChainResidueDetails
6TYR17-CYS36
site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFtAlvVVGDkn.GrVGfGtgkaq.EVpe.AI
ChainResidueDetails
fGLY28-ILE60
site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRgGKVWIKIFP
ChainResidueDetails
PLYS59-PRO70
site_idPS00591
Number of Residues11
DetailsGH10_1 Glycosyl hydrolases family 10 (GH10) active site. AIEVdITELNI
ChainResidueDetails
YALA140-ILE150
site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LAsRLdavVYSlglArTrrqARqLV
ChainResidueDetails
eLEU90-VAL114
site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHrrGlpVRGQ
ChainResidueDetails
nARG87-GLN100
site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGaGKGavegW
ChainResidueDetails
PARG82-TRP93
site_idPS00783
Number of Residues23
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. IKGMLPstrl.GEkqgkkLfVYgG
ChainResidueDetails
MILE106-GLY128
site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTYQpnkrkHskvh.GFrkR
ChainResidueDetails
7LYS3-ARG22
site_idPS00828
Number of Residues26
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CekCkvIkRkgkVmViCenp.KHkQrQ
ChainResidueDetails
9CYS11-GLN36
site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GsILyRQRGtkiypG
ChainResidueDetails
ZGLY42-GLY56
site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTHrGAaKRVkrtasgqlkrsraft.SH
ChainResidueDetails
8LYS5-HIS31
site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRkLWITRINaaaR
ChainResidueDetails
TLYS54-ARG70
site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkQLLEAGVHFG
ChainResidueDetails
cMET6-GLY17
site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PqaLFVvDprkErnaIaEarklNIP
ChainResidueDetails
cPRO158-PRO182
site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VkRrGKVR.RAKLYYLR
ChainResidueDetails
SVAL88-ARG103
site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GkRRLAYeIN
ChainResidueDetails
gGLY44-ASN53
site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDnVkVIaGkdKGke.GkV
ChainResidueDetails
XGLY6-VAL23
site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. DIssdsHPFYTgrqkfaaad....GR
ChainResidueDetails
4ASP49-ARG70
site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IeTTeaRaKevrsvvEkLITlGK
ChainResidueDetails
QILE30-LYS52
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues41
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues155
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues17
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues10
DetailsCompositional bias: {"description":"Gly residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues68
DetailsDomain: {"description":"KH type-2","evidences":[{"source":"HAMAP-Rule","id":"MF_01309","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues63
DetailsDomain: {"description":"S4 RNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_01306","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues63
DetailsDomain: {"description":"S5 DRBM","evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"3-methylthioaspartic acid","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

254587

PDB entries from 2026-06-03

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