9GLD

NONO/SFPQ filament: local refinement central units (strand 2)

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
AA	0000122	biological_process	negative regulation of transcription by RNA polymerase II
AA	0000380	biological_process	alternative mRNA splicing, via spliceosome
AA	0000785	cellular_component	chromatin
AA	0000976	molecular_function	transcription cis-regulatory region binding
AA	0002218	biological_process	activation of innate immune response
AA	0002376	biological_process	immune system process
AA	0003676	molecular_function	nucleic acid binding
AA	0003677	molecular_function	DNA binding
AA	0003682	molecular_function	chromatin binding
AA	0003723	molecular_function	RNA binding
AA	0005634	cellular_component	nucleus
AA	0005654	cellular_component	nucleoplasm
AA	0006338	biological_process	chromatin remodeling
AA	0016363	cellular_component	nuclear matrix
AA	0016607	cellular_component	nuclear speck
AA	0030425	cellular_component	dendrite
AA	0042382	cellular_component	paraspeckles
AA	0042752	biological_process	regulation of circadian rhythm
AA	0042754	biological_process	negative regulation of circadian rhythm
AA	0042803	molecular_function	protein homodimerization activity
AA	0042826	molecular_function	histone deacetylase binding
AA	0045087	biological_process	innate immune response
AA	0045892	biological_process	negative regulation of DNA-templated transcription
AA	0045944	biological_process	positive regulation of transcription by RNA polymerase II
AA	0048511	biological_process	rhythmic process
AA	0090575	cellular_component	RNA polymerase II transcription regulator complex
AA	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
AA	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
AB	0001650	cellular_component	fibrillar center
AB	0002218	biological_process	activation of innate immune response
AB	0002376	biological_process	immune system process
AB	0003677	molecular_function	DNA binding
AB	0003682	molecular_function	chromatin binding
AB	0003723	molecular_function	RNA binding
AB	0005634	cellular_component	nucleus
AB	0005654	cellular_component	nucleoplasm
AB	0005694	cellular_component	chromosome
AB	0005730	cellular_component	nucleolus
AB	0006281	biological_process	DNA repair
AB	0006310	biological_process	DNA recombination
AB	0006351	biological_process	DNA-templated transcription
AB	0006397	biological_process	mRNA processing
AB	0006974	biological_process	DNA damage response
AB	0008380	biological_process	RNA splicing
AB	0016363	cellular_component	nuclear matrix
AB	0016607	cellular_component	nuclear speck
AB	0042382	cellular_component	paraspeckles
AB	0042752	biological_process	regulation of circadian rhythm
AB	0042802	molecular_function	identical protein binding
AB	0045087	biological_process	innate immune response
AB	0045892	biological_process	negative regulation of DNA-templated transcription
AB	0048511	biological_process	rhythmic process
AB	0090575	cellular_component	RNA polymerase II transcription regulator complex
AB	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
AG	0000122	biological_process	negative regulation of transcription by RNA polymerase II
AG	0000380	biological_process	alternative mRNA splicing, via spliceosome
AG	0000785	cellular_component	chromatin
AG	0000976	molecular_function	transcription cis-regulatory region binding
AG	0002218	biological_process	activation of innate immune response
AG	0002376	biological_process	immune system process
AG	0003676	molecular_function	nucleic acid binding
AG	0003677	molecular_function	DNA binding
AG	0003682	molecular_function	chromatin binding
AG	0003723	molecular_function	RNA binding
AG	0005634	cellular_component	nucleus
AG	0005654	cellular_component	nucleoplasm
AG	0006338	biological_process	chromatin remodeling
AG	0016363	cellular_component	nuclear matrix
AG	0016607	cellular_component	nuclear speck
AG	0030425	cellular_component	dendrite
AG	0042382	cellular_component	paraspeckles
AG	0042752	biological_process	regulation of circadian rhythm
AG	0042754	biological_process	negative regulation of circadian rhythm
AG	0042803	molecular_function	protein homodimerization activity
AG	0042826	molecular_function	histone deacetylase binding
AG	0045087	biological_process	innate immune response
AG	0045892	biological_process	negative regulation of DNA-templated transcription
AG	0045944	biological_process	positive regulation of transcription by RNA polymerase II
AG	0048511	biological_process	rhythmic process
AG	0090575	cellular_component	RNA polymerase II transcription regulator complex
AG	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
AG	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
AH	0001650	cellular_component	fibrillar center
AH	0002218	biological_process	activation of innate immune response
AH	0002376	biological_process	immune system process
AH	0003677	molecular_function	DNA binding
AH	0003682	molecular_function	chromatin binding
AH	0003723	molecular_function	RNA binding
AH	0005634	cellular_component	nucleus
AH	0005654	cellular_component	nucleoplasm
AH	0005694	cellular_component	chromosome
AH	0005730	cellular_component	nucleolus
AH	0006281	biological_process	DNA repair
AH	0006310	biological_process	DNA recombination
AH	0006351	biological_process	DNA-templated transcription
AH	0006397	biological_process	mRNA processing
AH	0006974	biological_process	DNA damage response
AH	0008380	biological_process	RNA splicing
AH	0016363	cellular_component	nuclear matrix
AH	0016607	cellular_component	nuclear speck
AH	0042382	cellular_component	paraspeckles
AH	0042752	biological_process	regulation of circadian rhythm
AH	0042802	molecular_function	identical protein binding
AH	0045087	biological_process	innate immune response
AH	0045892	biological_process	negative regulation of DNA-templated transcription
AH	0048511	biological_process	rhythmic process
AH	0090575	cellular_component	RNA polymerase II transcription regulator complex
AH	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
BA	0000122	biological_process	negative regulation of transcription by RNA polymerase II
BA	0000380	biological_process	alternative mRNA splicing, via spliceosome
BA	0000785	cellular_component	chromatin
BA	0000976	molecular_function	transcription cis-regulatory region binding
BA	0002218	biological_process	activation of innate immune response
BA	0002376	biological_process	immune system process
BA	0003676	molecular_function	nucleic acid binding
BA	0003677	molecular_function	DNA binding
BA	0003682	molecular_function	chromatin binding
BA	0003723	molecular_function	RNA binding
BA	0005634	cellular_component	nucleus
BA	0005654	cellular_component	nucleoplasm
BA	0006338	biological_process	chromatin remodeling
BA	0016363	cellular_component	nuclear matrix
BA	0016607	cellular_component	nuclear speck
BA	0030425	cellular_component	dendrite
BA	0042382	cellular_component	paraspeckles
BA	0042752	biological_process	regulation of circadian rhythm
BA	0042754	biological_process	negative regulation of circadian rhythm
BA	0042803	molecular_function	protein homodimerization activity
BA	0042826	molecular_function	histone deacetylase binding
BA	0045087	biological_process	innate immune response
BA	0045892	biological_process	negative regulation of DNA-templated transcription
BA	0045944	biological_process	positive regulation of transcription by RNA polymerase II
BA	0048511	biological_process	rhythmic process
BA	0090575	cellular_component	RNA polymerase II transcription regulator complex
BA	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
BA	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
BB	0001650	cellular_component	fibrillar center
BB	0002218	biological_process	activation of innate immune response
BB	0002376	biological_process	immune system process
BB	0003677	molecular_function	DNA binding
BB	0003682	molecular_function	chromatin binding
BB	0003723	molecular_function	RNA binding
BB	0005634	cellular_component	nucleus
BB	0005654	cellular_component	nucleoplasm
BB	0005694	cellular_component	chromosome
BB	0005730	cellular_component	nucleolus
BB	0006281	biological_process	DNA repair
BB	0006310	biological_process	DNA recombination
BB	0006351	biological_process	DNA-templated transcription
BB	0006397	biological_process	mRNA processing
BB	0006974	biological_process	DNA damage response
BB	0008380	biological_process	RNA splicing
BB	0016363	cellular_component	nuclear matrix
BB	0016607	cellular_component	nuclear speck
BB	0042382	cellular_component	paraspeckles
BB	0042752	biological_process	regulation of circadian rhythm
BB	0042802	molecular_function	identical protein binding
BB	0045087	biological_process	innate immune response
BB	0045892	biological_process	negative regulation of DNA-templated transcription
BB	0048511	biological_process	rhythmic process
BB	0090575	cellular_component	RNA polymerase II transcription regulator complex
BB	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
BG	0000122	biological_process	negative regulation of transcription by RNA polymerase II
BG	0000380	biological_process	alternative mRNA splicing, via spliceosome
BG	0000785	cellular_component	chromatin
BG	0000976	molecular_function	transcription cis-regulatory region binding
BG	0002218	biological_process	activation of innate immune response
BG	0002376	biological_process	immune system process
BG	0003676	molecular_function	nucleic acid binding
BG	0003677	molecular_function	DNA binding
BG	0003682	molecular_function	chromatin binding
BG	0003723	molecular_function	RNA binding
BG	0005634	cellular_component	nucleus
BG	0005654	cellular_component	nucleoplasm
BG	0006338	biological_process	chromatin remodeling
BG	0016363	cellular_component	nuclear matrix
BG	0016607	cellular_component	nuclear speck
BG	0030425	cellular_component	dendrite
BG	0042382	cellular_component	paraspeckles
BG	0042752	biological_process	regulation of circadian rhythm
BG	0042754	biological_process	negative regulation of circadian rhythm
BG	0042803	molecular_function	protein homodimerization activity
BG	0042826	molecular_function	histone deacetylase binding
BG	0045087	biological_process	innate immune response
BG	0045892	biological_process	negative regulation of DNA-templated transcription
BG	0045944	biological_process	positive regulation of transcription by RNA polymerase II
BG	0048511	biological_process	rhythmic process
BG	0090575	cellular_component	RNA polymerase II transcription regulator complex
BG	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
BG	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
BH	0001650	cellular_component	fibrillar center
BH	0002218	biological_process	activation of innate immune response
BH	0002376	biological_process	immune system process
BH	0003677	molecular_function	DNA binding
BH	0003682	molecular_function	chromatin binding
BH	0003723	molecular_function	RNA binding
BH	0005634	cellular_component	nucleus
BH	0005654	cellular_component	nucleoplasm
BH	0005694	cellular_component	chromosome
BH	0005730	cellular_component	nucleolus
BH	0006281	biological_process	DNA repair
BH	0006310	biological_process	DNA recombination
BH	0006351	biological_process	DNA-templated transcription
BH	0006397	biological_process	mRNA processing
BH	0006974	biological_process	DNA damage response
BH	0008380	biological_process	RNA splicing
BH	0016363	cellular_component	nuclear matrix
BH	0016607	cellular_component	nuclear speck
BH	0042382	cellular_component	paraspeckles
BH	0042752	biological_process	regulation of circadian rhythm
BH	0042802	molecular_function	identical protein binding
BH	0045087	biological_process	innate immune response
BH	0045892	biological_process	negative regulation of DNA-templated transcription
BH	0048511	biological_process	rhythmic process
BH	0090575	cellular_component	RNA polymerase II transcription regulator complex
BH	1903377	biological_process	negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
CG	0000122	biological_process	negative regulation of transcription by RNA polymerase II
CG	0000380	biological_process	alternative mRNA splicing, via spliceosome
CG	0000785	cellular_component	chromatin
CG	0000976	molecular_function	transcription cis-regulatory region binding
CG	0002218	biological_process	activation of innate immune response
CG	0002376	biological_process	immune system process
CG	0003676	molecular_function	nucleic acid binding
CG	0003677	molecular_function	DNA binding
CG	0003682	molecular_function	chromatin binding
CG	0003723	molecular_function	RNA binding
CG	0005634	cellular_component	nucleus
CG	0005654	cellular_component	nucleoplasm
CG	0006338	biological_process	chromatin remodeling
CG	0016363	cellular_component	nuclear matrix
CG	0016607	cellular_component	nuclear speck
CG	0030425	cellular_component	dendrite
CG	0042382	cellular_component	paraspeckles
CG	0042752	biological_process	regulation of circadian rhythm
CG	0042754	biological_process	negative regulation of circadian rhythm
CG	0042803	molecular_function	protein homodimerization activity
CG	0042826	molecular_function	histone deacetylase binding
CG	0045087	biological_process	innate immune response
CG	0045892	biological_process	negative regulation of DNA-templated transcription
CG	0045944	biological_process	positive regulation of transcription by RNA polymerase II
CG	0048511	biological_process	rhythmic process
CG	0090575	cellular_component	RNA polymerase II transcription regulator complex
CG	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
CG	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
DA	0000122	biological_process	negative regulation of transcription by RNA polymerase II
DA	0000380	biological_process	alternative mRNA splicing, via spliceosome
DA	0000785	cellular_component	chromatin
DA	0000976	molecular_function	transcription cis-regulatory region binding
DA	0002218	biological_process	activation of innate immune response
DA	0002376	biological_process	immune system process
DA	0003676	molecular_function	nucleic acid binding
DA	0003677	molecular_function	DNA binding
DA	0003682	molecular_function	chromatin binding
DA	0003723	molecular_function	RNA binding
DA	0005634	cellular_component	nucleus
DA	0005654	cellular_component	nucleoplasm
DA	0006338	biological_process	chromatin remodeling
DA	0016363	cellular_component	nuclear matrix
DA	0016607	cellular_component	nuclear speck
DA	0030425	cellular_component	dendrite
DA	0042382	cellular_component	paraspeckles
DA	0042752	biological_process	regulation of circadian rhythm
DA	0042754	biological_process	negative regulation of circadian rhythm
DA	0042803	molecular_function	protein homodimerization activity
DA	0042826	molecular_function	histone deacetylase binding
DA	0045087	biological_process	innate immune response
DA	0045892	biological_process	negative regulation of DNA-templated transcription
DA	0045944	biological_process	positive regulation of transcription by RNA polymerase II
DA	0048511	biological_process	rhythmic process
DA	0090575	cellular_component	RNA polymerase II transcription regulator complex
DA	0098963	biological_process	dendritic transport of messenger ribonucleoprotein complex
DA	1902177	biological_process	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway